Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1298 ATGGCGAAGGGCGAGGAGGTGAAGCTTTTGGGGGCGTGGCCGAGTCCCTTTGTGATGAGGGCTCGCATAGCTCTGAACATAAAGAAAGTGAGCTATGAGTTCCTTGAAGAGACATTGGGAACGAAAAGCCAGCTTCTGCTTCAGTCCAATCCTGTTCACAAGAAAATCCCAGTTCTTATTCATGGAGACAAGCCTGTTTGTGAGTCTCTGATCATTGTGGAGTACGTGGACGAAGTGTGGTCCTCTGGCCCTTCCATTCTTCCCTCTGATCCCTATGATCGCGCCACTGCACGCTTCTGGGCTGCCTATTTGGATGAGAAGTGGTTCCCTGCGATGAAATCCCTTGGAAATGCAAGAGGAGAGGAAGAGAGGAAGGCATTGGTACAGCAATTAGAAGAAGGATTGGGTTTACTGGAAGATGCATACAAGAAGATCAGCAATGGCAAAGCCTACTTCGGTGGTGAACGAATCGGGTACCTTGACATCGCATTCGGGTGCTTCTTGGGGTGGATGAGGGTCGCACAGACATTTAATGGGCTTAAATTGCTGGACCACACTAAGACTCCTGGGCTGGCCCAATGGGCCGAAAGGTTCTGTGCTGATGCTGCTGTTAAAGATGTCATGCCTGAGACTGGGAAGCTTGTAGAGTTTGCTAGGATCCTTCATTCCAAAATGGCATCTTCCGCTGCAAATTAG 696 0.4957 MAKGEEVKLLGAWPSPFVMRARIALNIKKVSYEFLEETLGTKSQLLLQSNPVHKKIPVLIHGDKPVCESLIIVEYVDEVWSSGPSILPSDPYDRATARFWAAYLDEKWFPAMKSLGNARGEEERKALVQQLEEGLGLLEDAYKKISNGKAYFGGERIGYLDIAFGCFLGWMRVAQTFNGLKLLDHTKTPGLAQWAERFCADAAVKDVMPETGKLVEFARILHSKMASSAAN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1298 231 Gene3D - 87 230 - -
Dere13g1298 231 Pfam Glutathione S-transferase, C-terminal domain 99 200 IPR004046 -
Dere13g1298 231 SUPERFAMILY GST C-terminal domain-like 78 224 IPR036282 -
Dere13g1298 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Dere13g1298 231 SFLD Glutathione Transferase (cytosolic) 4 229 IPR040079 -
Dere13g1298 231 Gene3D Glutaredoxin 1 86 - -
Dere13g1298 231 SFLD Main.3: Omega- and Tau-like 4 229 IPR045073 -
Dere13g1298 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Dere13g1298 231 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Dere13g1298 231 FunFam Glutathione S-transferase GSTU6 2 87 - -
Dere13g1298 231 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Dere13g1298 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 215 IPR045073 -
Dere13g1298 231 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Dere13g1298 231 FunFam Glutathione S-transferase U9 87 228 - -
Dere13g1298 231 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1298 Dere-ChrDere13 17900792 17903699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1298 6 224 Glutathione S-transferase Gene Family AT1G10370 65.909 4.84e-107 306