Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1297 ATGTCGAAGGGTGAAGAGGTGAAGCTTTTGGGGGCATGGGCGAGCCCATATGTACTGAGGGCTCGTATAGCTCTTAAGATCAAATCGGTGAATTACGAGTTCGTGGAAGAGCAGCTTGGATCGAAGAGCCAGCTTCTTCTGCAATCCAACCCCGTGTACAAGAAAGTGCCAGTCCTCATTCATGGGGACGACCCCATTTGCGAGTCCTTGATCATCGTTCAGTACGTGGACGATGTATGGTGCTCCTCTGGCCCTTCCATTCTTCCCTCCTCTCCCTACGATCGCGCCGTTGCACGTTTCTGGGCCACCTACATCGACGACAAGTGGTATCCTGCCCTGAAAGCCATTGGAGGAGCGAAGAACGAGGAAGAGATCAAGCGTCTGGTGCAGCCAGTGGAAGAAGGACTGGCATTACTGGAAGATGCATACTGCAAGATCAGCAATGGCAAACCCTATTTCGGCGGCGACCACATAGGGTTTCTGGACGTTGCATTTGGGTGCTTCCTGGGATGGGTGAGGGTGACGGAGACCTTCACCGGTGTGGCGTTGCTCCATGAGAGCAAGAGGCCGGGGCTGGCGAAATGGGCCCAGAGGTTCTGCGAAGATGATGCTGTGAAACCTCTCATGCCAGAGACAGCCAAGCTTCTCGAGTTCTTTAAGGTTATTCGTGCCAGGATCTTCGGTTCTGCTTGA 693 0.5368 MSKGEEVKLLGAWASPYVLRARIALKIKSVNYEFVEEQLGSKSQLLLQSNPVYKKVPVLIHGDDPICESLIIVQYVDDVWCSSGPSILPSSPYDRAVARFWATYIDDKWYPALKAIGGAKNEEEIKRLVQPVEEGLALLEDAYCKISNGKPYFGGDHIGFLDVAFGCFLGWVRVTETFTGVALLHESKRPGLAKWAQRFCEDDAVKPLMPETAKLLEFFKVIRARIFGSA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1297 230 FunFam Glutathione S-transferase GSTU6 2 87 - -
Dere13g1297 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Dere13g1297 230 SFLD Main.3: Omega- and Tau-like 4 226 IPR045073 -
Dere13g1297 230 SFLD Glutathione Transferase (cytosolic) 4 226 IPR040079 -
Dere13g1297 230 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Dere13g1297 230 Gene3D - 88 228 - -
Dere13g1297 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Dere13g1297 230 SUPERFAMILY GST C-terminal domain-like 83 225 IPR036282 -
Dere13g1297 230 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Dere13g1297 230 Gene3D Glutaredoxin 1 87 - -
Dere13g1297 230 FunFam Glutathione S-transferase U9 88 228 - -
Dere13g1297 230 CDD GST_N_Tau 7 80 - -
Dere13g1297 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 217 IPR045073 -
Dere13g1297 230 Pfam Glutathione S-transferase, C-terminal domain 100 201 IPR004046 -
Dere13g1297 230 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1297 Dere-ChrDere13 17880240 17881522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1297 6 222 Glutathione S-transferase Gene Family AT1G10370 62.212 1.07e-100 290