Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1295 ATGTCAACATTCTCGAAGTCCAAAGTTCGCACCTCAGATGCTTCTGTTCCGAGAGTTACTAAAGAAGAAGAGGAGGTGTCATGTGTGGTGAAGCTAAGCAAAGAGAGAGAGAGGGCATTGGGAGAGAGGGGAGAAAAACTGAGAATCAAAATAGAAGAGAGAATAAACCAGAGAGAGCCTGAGAAGAATGAGAAACATAGAGTTCCGGGGAAACATGTAAGCGAGGAAAGAGTAAGAGAAGAAGAGAAAGGGCTTCCTAAGTTCGTCATCGACGGACTGAGCATTCCGACTTTTGGACTTTCCTCAAAAGTTAGAGTATATAATGCCATCGTGTTTGAGATAATGATGACATGTGGGTTGGTGTACATAGTGTGTGCGACAGCCGTCACCACCTCGATAGCAATGTTTTCACTTGACAGGAAATGGACTAAATGTGGGATGCGGGGAGGACGACAACAAGGACAAACAAGAATAACAAAGCGGAAAAAAAAAAAAGGAGATCTGAAAGGCAAAACAAGAAACAAAAACCATATAGGAAGACCTTGGGCTCAGAAGTGGGCACGTGAGGAAGGAGGAAACATTTCAAGGCTTGGGAATAAAAGGTTTAAGTTAAAAGACTTGAAGCTCTTCCGGTGCTTAAAAGAGTTAACAAAGGTCCTCGTTTGGCTTAAGTTGGTAGAGGTTTATATTGGTTTTCCTGTAAAGCTTCTCGCTTCCAAAGATTACCGTGAAGATCTCGCTCAGCTTGCACCCACGTTAGAAGAATACAGGGGCTTGATGATAATGCCTGTTAATAGAGACACTCCCGTATACTTGTACCTTGGATATCTCCCTTCCAAGCCCATGGCAGCTCAAATTCTGGGGGAGGAACCTACACGAGTACAGTTATGCAGCTTTGGGGCAACAAAAGGTTTATCCAGGAAATATTTAGAGGAAAGGTTGGAGGCATTAGCTGAGAAGGGGAATAGGGTTGTTTTCATAAGAGTCCTCACCCTGGCGGTATATAAGTTAGTATTATTCCTATCGGTAGTGGGAGTAGTTGATCTGGCAGCAGTTAATGAATGTTTGGCCAAGCAATTAGAAGGTAAAAAGTCTGAGCTGCAAAGTTTGGAGGAATTAAGTAAAAGGCACTTGGAAAGCTTAGCCAAGTCACAAAAAGACAAGAGAGCGAATAGGAGAAAAGAGTCAGAGATGAATATCAAGTTGAAGAGATTGAAGGAGGAAAATAACAAATTAAAAGACACCGTAAGTAGGATTCAAAGACGCACTGAAGAAAGTAACAAAAAGGCCCTTAATTATCAAACTCGATTGTTAAAGGCTGTTAAAGAAAAGGATGCCATGATGAGGGGTAGAAGCATAAGGTTATCAGGAATGGAATTAGGGGGTGTTTTCACCTATGATCTCCAAGGAGGAGAACCGGCTATCGCGTTCACCAGTCCTACCCAACCCGCTGCCAATACTTGCCTCAAGGTGAAAGAGGATAATGAGAAGAAAGACTGAATAGCCCAAAGGTGGAGAGCCACAATAGCTGAGGTTCAACCACCACTTATGGACTTGGAATTATGTTCCTATTTCATTCATACCTTGGGAGACCCGTATCGTAAAATCATGTTAGGGACTCATGTGAATGAATTTGCCGACTTTATCCAAGTTAGGGAGAGAATAGATGCTGATGTACGTGACGGATTGTTTGAAAATACATCCACAGAAACTAGGAGGCCTATAAGCAATTAA 1734 0.4245 MSTFSKSKVRTSDASVPRVTKEEEEVSCVVKLSKERERALGERGEKLRIKIEERINQREPEKNEKHRVPGKHVSEERVREEEKGLPKFVIDGLSIPTFGLSSKVRVYNAIVFEIMMTCGLVYIVCATAVTTSIAMFSLDRKWTKCGMRGGRQQGQTRITKRKKKKGDLKGKTRNKNHIGRPWAQKWAREEGGNISRLGNKRFKLKDLKLFRCLKELTKVLVWLKLVEVYIGFPVKLLASKDYREDLAQLAPTLEEYRGLMIMPVNRDTPVYLYLGYLPSKPMAAQILGEEPTRVQLCSFGATKGLSRKYLEERLEALAEKGNRVVFIRVLTLAVYKLVLFLSVVGVVDLAAVNECLAKQLEGKKSELQSLEELSKRHLESLAKSQKDKRANRRKESEMNIKLKRLKEENNKLKDTVSRIQRRTEESNKKALNYQTRLLKAVKEKDAMMRGRSIRLSGMELGGVFTYDLQGGEPAIAFTSPTQPAANTCLKVKEDNEKKDXIAQRWRATIAEVQPPLMDLELCSYFIHTLGDPYRKIMLGTHVNEFADFIQVRERIDADVRDGLFENTSTETRRPISN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1295 577 Coils Coil 353 429 - -
Dere13g1295 577 MobiDBLite consensus disorder prediction 155 174 - -
Dere13g1295 577 MobiDBLite consensus disorder prediction 149 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1295 Dere-ChrDere13 17847526 17858943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1295 87 129 Major Intrinsic Protein MIP AT2G36830 62.791 7.44e-10 58.2