Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1263 ATGTTGCTCCTGAACCTTCAGTTTGCGGGGGGGAGTTTTAGGGTTTTGCAAGCGTACGCTGTTTGGAGAATGCCGACGGATCGATCAAAATCGGAGAAGCGCGATGCTGCGAAGCAGCACCGGCGGGACCCCTATGAGGTTCTCGGCGTTTCGCGCAACTCAACTGATCAAGAAATTAAAGTTGCTTACCGAAAATTGGCTCTCAAATATCATCCTGACAAGAATTCTGATGATCCTAAAGCTGCTGATATGTTTAAAGAGGTCACCTTTTCTTATAATATCTTGTCAGATCCTGAAAAACGCCGTCAGTACGACTCAGCTGGTTTTGAGGCTGTTGAATCAGATAACCAAGACTTGGAGTTGGATCTTTCAAGTTTAGGTGCAGTGAATACGATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGGGCAGTGATCATTAATACACTTCCATTGGGGCTGCCTATATCTAAAAGGGTTGAGAAGCAGTGTGCTCACTTTTATTCAGTTACATTAACAGAAGAGGAAGCACAGGCTGGATTTGTTTGCCGTGTGTTATCATCAGACAAAAGCAAGTTCAAGTTATTATATTTTGATCAAGAAGAGAATGGTGGATTAAGTCTTTCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTAACTTCTGCGGGAATGTATTTTCTTGGGTTTCCTGTCTATCAGTTGGATCAAACCCTGAACTCAATAGCCGCTGCTAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGCATTCCGGCCATGTGAATTAACAGAATTAAAGGCTGGTACTCATGTCTTTGCCGTTTATGGTGACAATTTTTTCAAAAGTGCAAGCTATATTATAGAAGCTTTATGTGCTGCGCCTTTTAGTCAAGAAAAAGAAAATCTCAAAAATGTAGAAGCTCAAATTTTATCTAAAAGGGCGGACCTACCAAAGTTTGAGTGTGATTACCGAGAGGTTCTGGCACAATTTACGGAGATGACAAGCAGATATACGCAAGAAATGCAAGCGATTGATGAGCTACTCAAGCAAAGGAATGAAATACATGCATCATATACTATTGCTCCATTAAAACGAAGTACGACTAAGAGCAGGAGTAAAAGTTCTTCCAAGGAGGCAAAGGAGGATGGCCAAGCAAGAGAGAAGAAAAATACAAGAGATCGATTGAAGAAGAAGAGATGGTATAACATCCATATAAAAGTTGCTAAGAGAAAAGCTTGCTAA 1296 0.4105 MLLLNLQFAGGSFRVLQAYAVWRMPTDRSKSEKRDAAKQHRRDPYEVLGVSRNSTDQEIKVAYRKLALKYHPDKNSDDPKAADMFKEVTFSYNILSDPEKRRQYDSAGFEAVESDNQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGAVIINTLPLGLPISKRVEKQCAHFYSVTLTEEEAQAGFVCRVLSSDKSKFKLLYFDQEENGGLSLSLQEDSAKTGKVTSAGMYFLGFPVYQLDQTLNSIAAAKDPDTSFFRKLDAFRPCELTELKAGTHVFAVYGDNFFKSASYIIEALCAAPFSQEKENLKNVEAQILSKRADLPKFECDYREVLAQFTEMTSRYTQEMQAIDELLKQRNEIHASYTIAPLKRSTTKSRSKSSSKEAKEDGQAREKKNTRDRLKKKRWYNIHIKVAKRKAC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1263 431 Gene3D DnaJ domain 25 126 IPR036869 -
Dere13g1263 431 MobiDBLite consensus disorder prediction 382 415 - -
Dere13g1263 431 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 28 430 - -
Dere13g1263 431 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Dere13g1263 431 PRINTS DnaJ domain signature 45 63 IPR001623 -
Dere13g1263 431 PRINTS DnaJ domain signature 63 78 IPR001623 -
Dere13g1263 431 PRINTS DnaJ domain signature 100 119 IPR001623 -
Dere13g1263 431 PRINTS DnaJ domain signature 80 100 IPR001623 -
Dere13g1263 431 FunFam Chaperone protein dnaJ 16 27 125 - -
Dere13g1263 431 MobiDBLite consensus disorder prediction 389 408 - -
Dere13g1263 431 SMART dnaj_3 42 100 IPR001623 -
Dere13g1263 431 SUPERFAMILY Chaperone J-domain 40 112 IPR036869 -
Dere13g1263 431 ProSiteProfiles dnaJ domain profile. 43 108 IPR001623 -
Dere13g1263 431 CDD DnaJ 43 97 IPR001623 -
Dere13g1263 431 Pfam DnaJ domain 43 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1263 Dere-ChrDere13 17452690 17456388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1263 36 106 C2H2 Transcription Factor Family AT1G74250 40.789 5.84e-11 62.8