Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1248 ATGGCGGAGGCTGTGCTTGAAGTTGTACTTGGGAATTTGAGTTCACTCATTCAAAAAGAGGTTGGTCTGTTTCTGGGTGTGGACCAAGAGATGAAAAGGCTTTCCAGCATAATCACTACAATCAAGGCTGTGCTTGAAGATGCTGAGGTGAAGCAACTCACAAACAGAGCTCTCAAGGATTGGCTGCGCAAGCTTAAGGATGCAGCTCACTTGCTGGATGACATATTGGATGAGTGTTCAACTGAAGCCCTTGAGTTGGAATACCAAGGACACAAGTGTGGATCAGCAGACAAGGTACAAGGCTCTTGCTTATACTCTTTCCATCCCAGTCATGTTCTGTTTCGTTACAAAATTGCCAAGAAGATGAAAGACATAAGTAAGAGATTAGATGAGATTGCTGAGGAAAAGTCGAAGTTTCACTTGCGTGAGACGGTTACTGAGAGCAGAAATGAAATCATGGAATGGAGACAAACTACCTCAATCATTACTCAACCCCAAGTCTTTGGAAGAGAAGAAGAAAAGGAAAAAATTATAGACGTTTTGGTTGGTGATGCTTCAAATTTTGAAGATGTGTCAATCTATCCAATTATTGGTATTGGCGGTCTTGGAAAAACTACTCTTGCCCATCTTGTCTTCAATGACGAGAGGGTAGTTAATCATTTTGAGCTAAGAATTTGGGTATGTGTTTCTGAAGATTTTAGCTTGCAGAGAATGTCAAAAGCTATAGTGGAACAAGCTTGTAAACAAGACTGTGGGAATTTAGATCCAGAGGCATTACAAAGAAGAGTTCAAGAGTTACTTGGAAGAAAAAGATATTTGATTGTTCTAGATGACGTGTGGAATGATAACCAAGAGAAATGGGATAAGTTGAAATATGTATTGGCTTGTGGGTCAAAGGGTGCTTCAATTTTGGTCACCACGCGTGTTCCAATGGTTGCATCCATCATGGGAACAATGCCTTCTCATAAATTATCAATGTTATCTGAAGATGATTGTTGGGAGCTGTTTAAACAACGAGCTTTTGGACCAGACAAGGAGGAACGCGCAGAGCTTGTGGCCATAGGGAAGGAGATAGTGAAGAAGTGTAAAGGAGTTCCTCTTGCAGCTAAAACACTAGGAAGTCTTTTGCGCTTCAAAATTGAGGAAAGAGACTGGCTTCATATCAAGGAAAGTGAGATTTGGAGTTTACCCCAAGATGAATATTCTATCCTGCCGCTCTAA 1221 0.4103 MAEAVLEVVLGNLSSLIQKEVGLFLGVDQEMKRLSSIITTIKAVLEDAEVKQLTNRALKDWLRKLKDAAHLLDDILDECSTEALELEYQGHKCGSADKVQGSCLYSFHPSHVLFRYKIAKKMKDISKRLDEIAEEKSKFHLRETVTESRNEIMEWRQTTSIITQPQVFGREEEKEKIIDVLVGDASNFEDVSIYPIIGIGGLGKTTLAHLVFNDERVVNHFELRIWVCVSEDFSLQRMSKAIVEQACKQDCGNLDPEALQRRVQELLGRKRYLIVLDDVWNDNQEKWDKLKYVLACGSKGASILVTTRVPMVASIMGTMPSHKLSMLSEDDCWELFKQRAFGPDKEERAELVAIGKEIVKKCKGVPLAAKTLGSLLRFKIEERDWLHIKESEIWSLPQDEYSILPL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1248 406 Gene3D - 146 319 IPR027417 -
Dere13g1248 406 Gene3D - 326 400 IPR042197 -
Dere13g1248 406 PRINTS Disease resistance protein signature 266 280 - -
Dere13g1248 406 PRINTS Disease resistance protein signature 362 376 - -
Dere13g1248 406 PRINTS Disease resistance protein signature 193 208 - -
Dere13g1248 406 Pfam Rx N-terminal domain 5 91 IPR041118 -
Dere13g1248 406 PANTHER DISEASE RESISTANCE PROTEIN RP 42 403 IPR044974 GO:0006952
Dere13g1248 406 CDD RX-CC_like 2 134 IPR038005 -
Dere13g1248 406 Gene3D - 5 130 - -
Dere13g1248 406 FunFam Probable disease resistance protein At1g61300 148 321 - -
Dere13g1248 406 Pfam NB-ARC domain 171 390 IPR002182 GO:0043531
Dere13g1248 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1248 Dere-ChrDere13 17243371 17244591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1248 190 373 WRKY Transcription Factor Family AT5G45050 26.667 2.30e-06 48.1