Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1228 ATGGGGAAGCTGCTTCTGCCATTTCTGGGAATGGTGATGGCGGAGTGTGCACAGGTTGGTCTAATCATATTGAGCAAAATGGTCATGTCAAAAGGGATGAGCAGCTTCGTTTTCGTCTTCTTCTCCAACACACTCGCTGCCCTCCTTCTGCTTCCTTCTTCCTTGCTCATCCACAGGTCTGAGCGCCCCCCAATCACGTTTTCCACTCTGTGTGGATTCTTCTCACTTGGGTTGCTTGGTTATTTGGCGCAGGTTTTTGGGTATGCTGGGATTTACTACAGCTCTGCTACACTCAGCTCGGCCTTGCTCAACCTTGTTCCGGGTTTTACATTCATTCTTGCGGTTGTTTTTAGAATGGAAAATTTTAATTGGCGAAGCTCTAGTAGCCTAGCTAAATCACTGGGAACTACAGTATCAATTGTTGGTGCATTTGTTGCAACTCTATACAAAGGCCCTCCACTTCTGACAAGGCTATCACCTGCAAACTTGCCTCCACAGCAACTTTTCTCGGAAGAATCTAATTTTGTAGTTGGAGGACTGTTTCTTGCAGCCGATTGTGTGATGGCTTCAGCATATATTATTGTACAGGCTTCAATTCTGAAGAAATATCCAGCAGAGTTGATTGTAGTATTCTTTTACTGTTTCTTTGTGGCCATTCTATCCGGCGTGACTTGCTTATTTATGGACAGAGACACAGGTGCCTGGAGCTTACAACCCAACTTGAGATTGCTTGCAGTTCTGTACTCGGGAGTGTTTGGTTCTGCATTTCAAGTAGGTGTTGTTACGTGGTGTCTACACCAGACAGGACCTGTTTTTGTTTCTATGTTCAAGCCCTTAGGAATTGTCATCTCAGTGGTTGTAGGTGTCATGTTCCTTGGAGATCCGTTCTATCTTGGAAGTTTGGTTGGTGCTACTGTGATAGTTATTGGTTTCTATGCTGTGTTGTGGGGAAAAGCCAAAGACATTGAAGATGCTGGCACGAGAAACTCAGAATCGAGGGGTGAAAACACCCCTCTTTTGAAGTAA 1026 0.4483 MGKLLLPFLGMVMAECAQVGLIILSKMVMSKGMSSFVFVFFSNTLAALLLLPSSLLIHRSERPPITFSTLCGFFSLGLLGYLAQVFGYAGIYYSSATLSSALLNLVPGFTFILAVVFRMENFNWRSSSSLAKSLGTTVSIVGAFVATLYKGPPLLTRLSPANLPPQQLFSEESNFVVGGLFLAADCVMASAYIIVQASILKKYPAELIVVFFYCFFVAILSGVTCLFMDRDTGAWSLQPNLRLLAVLYSGVFGSAFQVGVVTWCLHQTGPVFVSMFKPLGIVISVVVGVMFLGDPFYLGSLVGATVIVIGFYAVLWGKAKDIEDAGTRNSESRGENTPLLK 341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1228 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 319 - -
Dere13g1228 341 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Dere13g1228 341 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020
Dere13g1228 341 Pfam EamA-like transporter family 20 143 IPR000620 GO:0016020
Dere13g1228 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 147 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g1228 Dere-ChrDere13 17036711 17039096 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1228 5 340 Nodulin-like Gene Family AT5G40240 45.322 7.07e-93 280