Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1217 ATGTATAAGCTTGCAGACCCCAAATTTGCCGGCTGGATTTCAGAGCATTATTCTCGTCTTGCTTATAGCCATGTGGATGTCTTCAATTATTCCTCTGTAGTCCTTAACTGGGTTGGCCCTTTCTTCTGCAATTGGGTTTATGATTTCGGTCACAATGCTCCTTCTAGATTTCTAAGAGCACATGCCATGGATCTTGAAACTGGAACTCCTCAGAATTCTGTTGCTAAGAAAGAATCGTGGAAGACGGTTCTGACTTTGGCATACCAGAGCCTCGGAGTTGTCTATGGCGATTTAAGCACTTCACCGCTGTACGTGTACAGGAGCACATTTGCTGAAGATATTGGACACACAGAGACCAACGAAGAGATTTATGGCGTTTTGTCTTTGGTGTTCTGGACTTTCACGCTGGTCCCTTTGATCAAATACGTGTTCATCGTGCTCAAAGCTGACGATAATGGCGAAGGGGGTACATTTGCTCTGTACTCCTTGCTGTGTCGCCATGCTCGAGTCAACTCAATGCCCAATTGCCAGGTGGCAGACGAGGAGCTCTCGGAGTATAAGAAGGATAGTTTGGGTTTGGCCCCAGAGAGAAGCTTTGCCTCGAGATTGAAGGCCACGTTGGAGAAGCACAAGGTTTTGCAGAGGATTTTGCTTGTTCTGGCTTTGATTGGAACTTGCATGGTGATTGGTGATGGCATCCTCACACCTGCTCTTTCTGTATTCTCAGCGGTTTCGGGCCTTGAGCTTTCAATGTCCAAGGAACATCACAGATATGTAGAAGTCCCGGCTGCATGCATCATACTGATAGGCTTGTTTGCCCTTCAACATTTTGGCACGCACAGGGTTGGCTTCTTGTTTGCTCCTATAGTAATCACATGGCTTCTCTGCATCAGTGCCATCGGTATATATAATATATTTCACTGGAATCCTCATGTGTATAAAGCACTCTCTCCTTATTATGTTTTCCAATTTCTAAGGAAAACTCAAAAAGGAGGTTGGATGTCCCTTGGTGGAATTTTGTTGTGTATAACAGGATCAGAAGCCATGTTTGCTGATCTCGGGCACTTTTCACAATTATCAATCAAGATTGCTTTCACAGCTGTGGTTTATCCGTCTTTAATCCTGGCATATATGGGCCAAGCTGCTTATCTATCTAAACATCATGATGTCGCCCACGAGTATCAATTCGGATTTTACGTATCTGTACCAGAGAAATTAAGATGGCCTGTTCTGGTGATAGCCGTACTAGCTGCAGTTGTTGGAAGCCAAGCCATTATCACTGGAACTTTCTCAATCATCAAGCAGTGCTCTGCACTAAGTTGCTTCCCAAGAGTCAAAGTGATACACACATCATCAAAAATTCACGGGCAAATATATATCCCTGAGATCAACTGGCTATTGATGTTCTTGTGCTTGGCTGTCACAATAGGTTTCCGAGACACAAAGCGCTTGGGCAATGCATCAGGTTTGGCAGTCATCTCGGTGATGCTGGTCACCACGTGTTTGATGTCTCTGGTGATTGTACTGTGCTGGCACCAGAGTGTTTTCCTCGCTCTCGGATTTGTTTTCGTATTTGGGACCATTGAGGCTTTATTCTTCTCAGCTTCTCTGGTCAAGTTCCTGGAAGGAGCATGGGTGCCAATTGCTTTGGCATTTGTATTCCTAACTGTCATGTATGTTTGGCACTATGGCACTCTTAAAAAGTATGAATTTGATGTTCAGAACAAGGTTTCCATCAACTGGCTTCTCAGCCTAGGTCCCAGCATAGGCATTGTACGAGTGCGTGGGATCGGGCTTATACACACTGAGCTAGTATCTGGAATTCCTGCAATCTTCTCCCACTTTGTGACCAACCTGCCAGCATTCCACCAGGTCCTAGTCTTTCTCTGCATCAAACATGTCCCAGTTCCACATGTCAGACCTGAGGAACGGTTCCTAGTGGGTCGAATAGGCCCAAGAGATTTCAGACTTTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGACGACATAGAGTTTGAGAAAGATCTTGTGTGCAGCATAGCTGAGTTTATCCGAACTGAAAGTGAAGGATTGAATGCTGCAATTGAAGAGGCTGAAAAAAATGGCAAAATGACGGTTGTTGGAACATGTTCTTCCCATCCCATATTGATGAGTGAAGAAGACACATTTGATAATAATAATATTAATAGTAGCAGTCATTTAGATTCAGCTGAGACATCGTCGGAGCTCAGGGAGATAAAGTCGCCGAAAGTGATCCGACCAAAGAAAAGGGTGAGGTTTATAGTACCAGAGAGCCCAAAGATTGATAATGGTTCAAGGGAAGAATTGCAGGAGCTGATGGAAGCAAGGGAATCTGGGGTGGCCTACATTATAGGGCAGTCCTATATGAGAGCAAAACCAGGGTCCAGTATGTTGAAGAAATTGGTGATTGATTATGGGTATGAATTCTTGAGGAGGAATAGTAGAGCACCCCCCTATGTAGTTAGTGTACCTCACGCCTCATCTTTTGAAGTAGGGATGATGTACCAAGTTTGA 2547 0.4456 MYKLADPKFAGWISEHYSRLAYSHVDVFNYSSVVLNWVGPFFCNWVYDFGHNAPSRFLRAHAMDLETGTPQNSVAKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYRSTFAEDIGHTETNEEIYGVLSLVFWTFTLVPLIKYVFIVLKADDNGEGGTFALYSLLCRHARVNSMPNCQVADEELSEYKKDSLGLAPERSFASRLKATLEKHKVLQRILLVLALIGTCMVIGDGILTPALSVFSAVSGLELSMSKEHHRYVEVPAACIILIGLFALQHFGTHRVGFLFAPIVITWLLCISAIGIYNIFHWNPHVYKALSPYYVFQFLRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTAVVYPSLILAYMGQAAYLSKHHDVAHEYQFGFYVSVPEKLRWPVLVIAVLAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMFLCLAVTIGFRDTKRLGNASGLAVISVMLVTTCLMSLVIVLCWHQSVFLALGFVFVFGTIEALFFSASLVKFLEGAWVPIALAFVFLTVMYVWHYGTLKKYEFDVQNKVSINWLLSLGPSIGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVRPEERFLVGRIGPRDFRLYRCIVRYGYRDVHKDDIEFEKDLVCSIAEFIRTESEGLNAAIEEAEKNGKMTVVGTCSSHPILMSEEDTFDNNNINSSSHLDSAETSSELREIKSPKVIRPKKRVRFIVPESPKIDNGSREELQELMEARESGVAYIIGQSYMRAKPGSSMLKKLVIDYGYEFLRRNSRAPPYVVSVPHASSFEVGMMYQV 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1217 848 NCBIfam potassium uptake protein 86 848 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dere13g1217 848 Coils Coil 685 705 - -
Dere13g1217 848 Pfam K+ potassium transporter 88 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dere13g1217 848 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 75 847 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1217 Dere-ChrDere13 16882789 16889165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1217 63 848 Inorganic Solute Cotransporters AT1G70300 75.158 0.0 1222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1582 09 20139112 20144704 Dere13g1217 13 16882789 16889165 CCT
Dere13g1217 13 16882789 16889165 Dere13g1217 13 16882789 16889165 ECH