Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1151 ATGGATGTCCCAGATTCTGCAATTGAATCTCAGCAACCCAAATTCGCTCTTCCTGTGGATTCTGAACACAAGGCCACTGAGTTCAGATTATTCTCAGTGGCTAAGCCCCACATGCGAGCATTCCATCTTTCTTGGATTTCCTTCTTCTCATGCTTTGTGTCTAGTTTTGCTGCGCCTCCTCTCCTTCCTATCATTCGTGATAACCTCAACCTTACAGCCACAGATATTGGAAATGCCGGGATTGCATCAGTTTCAGGAGCAGTTTTTGCTCGAATTGCAATTGGGACTGCCTGTGACTTATTTGGCCCCCGTCTTGCCTCTGCCTCCATCATCCTCCTCACAGCACCAGCAGTCTACTTCACTTCCATTATCTCATCTGCTACCTCCTTTCTCCTCGTGCGCTTCTTCACAGGCTTCTCCATAGCCACCTTTGTTTCAACCCAGTTCTGGATGAGCTCCATGTTCTCTTCTCCAGTAGTGGGTTCAGTCAATGGAATTGCAGCTGGATGGGGCAATCTTGGAGGAGGAGCCACACAACTCATTATGCCCCTTGTATTTGGGCTAATCCGTGATATTGGCGCTGTCAAATTCACAGCATGGCGAATTGCATTCTTCATTCCTGCAATGTTTCAAATGCTAACAGCTTTTGCCATATTAGTATTTGGCCAGGATTTGCCAGATGGGAACTTCTATGGCTTGAAGAAATCAGGGGAGAAGCCAAAGGATGACTTCTCAAGAGTGCTGTTTTATGGGATTACAAATTACAGAGGGTGGATTCTGGCTTTGACTTATGGCTATTGCTTTGGGGTAGAGCTAACAGTGGACAATATCATAGCTGAATACTTCTATGACAGATTTGATCTTAAACTCCACACAGCAGGAATAATTGCTGCAAGCTTTGGATTAGCTAATGTGGTTTCACGACCTGCAGGGGGCTATATATCAGATTTAATGGCAAAGAGGTTTGGAATGAGAGGTAGACTATGGGCCTTATGGCTGTGCCAAACATTAGGAGGTGTTTTCTGTATAATCCTTGGCAAGGTGGGATCTCTAAGTGTATCCATCGTTGTCATGATCATATTCTCTATATTTGTTCAAGCTGCTTGTGGGCTGACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGATCATTGGGGGTCATATCTGGAATGACAGGAGGTGGAGGGAATTTGGGTGCAGTTTTGACCCAGCTAATATTCTTCAAAGGATCCCAATATTCAAAAGAAAGAGGGATAACCCTGATGGGTGTCATGATCATAATCTGCACCCTCCCAATATGTTTGATCTACTTCCCACAATGGGGTGGGATGTTTTGCGATCCATCATCCAAAACGGTTTCAGAAGAAGACTACTACTTGTCTGAGTGGAACTCAAAAGAGCAGGAGAAGGGCTCTCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAATGAAAGAGGAAAAAGAGTTAACGCTTCAACCAGGCCCTCTGATAAAGCCACACTGCCAAATGCTTGA 1518 0.4473 MDVPDSAIESQQPKFALPVDSEHKATEFRLFSVAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGIASVSGAVFARIAIGTACDLFGPRLASASIILLTAPAVYFTSIISSATSFLLVRFFTGFSIATFVSTQFWMSSMFSSPVVGSVNGIAAGWGNLGGGATQLIMPLVFGLIRDIGAVKFTAWRIAFFIPAMFQMLTAFAILVFGQDLPDGNFYGLKKSGEKPKDDFSRVLFYGITNYRGWILALTYGYCFGVELTVDNIIAEYFYDRFDLKLHTAGIIAASFGLANVVSRPAGGYISDLMAKRFGMRGRLWALWLCQTLGGVFCIILGKVGSLSVSIVVMIIFSIFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNLGAVLTQLIFFKGSQYSKERGITLMGVMIIICTLPICLIYFPQWGGMFCDPSSKTVSEEDYYLSEWNSKEQEKGSHHASLKFADNSRNERGKRVNASTRPSDKATLPNA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1151 505 FunFam High affinity nitrate transporter 2.5 33 229 - -
Dere13g1151 505 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 440 IPR020846 GO:0022857
Dere13g1151 505 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Dere13g1151 505 MobiDBLite consensus disorder prediction 465 505 - -
Dere13g1151 505 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Dere13g1151 505 Gene3D MFS general substrate transporter like domains 247 441 IPR036259 -
Dere13g1151 505 FunFam Nitrate transporter 2.1 241 442 - -
Dere13g1151 505 SUPERFAMILY MFS general substrate transporter 30 437 IPR036259 -
Dere13g1151 505 MobiDBLite consensus disorder prediction 465 493 - -
Dere13g1151 505 Gene3D MFS general substrate transporter like domains 32 229 IPR036259 -
Dere13g1151 505 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 490 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1151 Dere-ChrDere13 15946299 15948482 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1151 14 497 Inorganic Solute Cotransporters AT1G12940 75.413 0.0 769