Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1121 ATGGTCGGAGTCGGATATGACACTCCCAAATCCACCCTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCTCGTTATCCCGACGGCAAGCTCCGTTACCTCGGCGGCCACACCCGTGTCCTCTCCGTTCCCCGCTTCATTGCTTTTTCCGAGCTGTTGTTGAAGATGGGGGAGCTGAGTGGCTCAGCTGTTAGCCTCCGTTGCCAATTGCCCACCGAAGATCTTGATGCTTTGGTTTCTATAACCTCAGACGAAGATCTAGCAAATCTCATCGAGGAATATGAACGTGTTGCGTCGCCATCATCCTCTTTTAAGATCAGAGCCTTCCTCTCGCCGCCAAAATCATTCAACAAATTTTCTTCCGCTTCCTCATCATCACCGTCACCGTCGTTGTCTTTGTCCAAATCATCCTCATCTACGTCGTCGTCTTCATCTCGCCCTCCTACTGCTACTTGTGGTTGTTCTGGTTTTGGTTCAAGTCGGAGGTACCTGGTGATGCCACCCGCGCTCGACCGTTGCGTCCATCCGATGTCGGCGCCGATGGCATATCCAAATGGCCTGGCGAAATCTGCTGGGAGGAATATTCCTCTTCCTCACTATGTTCTTCATGCTCAGGGAAACCCTGGCCACATTTACCTCATCCACAACGGGAACCACTGGCAATAG 669 0.5217 MVGVGYDTPKSTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLSVPRFIAFSELLLKMGELSGSAVSLRCQLPTEDLDALVSITSDEDLANLIEEYERVASPSSSFKIRAFLSPPKSFNKFSSASSSSPSPSLSLSKSSSSTSSSSSRPPTATCGCSGFGSSRRYLVMPPALDRCVHPMSAPMAYPNGLAKSAGRNIPLPHYVLHAQGNPGHIYLIHNGNHWQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1121 222 SMART PB1_new 27 114 IPR000270 GO:0005515
Dere13g1121 222 SUPERFAMILY CAD & PB1 domains 29 121 - -
Dere13g1121 222 PANTHER OS05G0427100 PROTEIN-RELATED 9 153 - -
Dere13g1121 222 Gene3D - 31 112 - -
Dere13g1121 222 Pfam PB1 domain 29 111 IPR000270 GO:0005515
Dere13g1121 222 CDD PB1_UP2 16 111 - -
Dere13g1121 222 MobiDBLite consensus disorder prediction 121 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1121 Dere-ChrDere13 15569370 15570133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1121 7 111 MAP Kinase Kinase Kinase AT3G46920 50.467 3.71e-29 112