Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1113 ATGGCAGAGAGCTTGGACAGTGCGACCTCGACCCTTCTTTGTTCGGAGAACAGTAATACCTGCTTTGCTGATTTCGAATTTAATTCCGCAGATGAGTCTGAGATTTCTCCTTCGTGGAACCACCAAAACGTTAACGCTTACCATCATTGTCTGAGTTCAGGCAGTGATGGGTTCCAATCCTTATTGGGTTTTCCTGTGCAGAGTGAAGAAAATTTGAGTTTAGTGATTGAGAGGGAGAGAGACTATATGCCCAGAGATGATTACCTGAAAAGATTGCATAGTGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCCCTTGATTGGATTTGGAAGGCTCATACCTATTATGGTTTTGGACCATTGAGCTTTTGTCTATCTCTCAACTACTTCGATCGATTCCTGTCAATATATGAATTACCTAGAGGTAAATCTTGGGCCGTGCAGTTGTTAGCTGTAGCTTGTTTGTCAATAGCAGCTAAAGTGGAGGAAACTGAAGTGCCTCAATCTGTTGATTTACAGGTTGGAGAACCGAAGTACGCATTTGAAGCTAAAACCATTCAAAGAATGGAGCTACTGGTATTAAGCACATTGAGATGGAAAATGCAGGCTTTGACTCCTTGTTCCTTCATAGACTACTTCCTCAATAAAATCACTTACGACCAACAAAATCCAGCAAAGTCATCCATTTCTAGGTCAGTACAGCTCATACTGAGTACAATGAGAGGTATTGACTTCTTGGAATTCAAGCCTTCTGAGATAGCTGCTGCAGTGGCCATTTCTGTTTCAAGGGAACTGCAAGCAATTGAGATTGATAAGGCCATAACTTGTTTTGGGATTGTAGATAAGGAGAGAGTTCTGAAGTGTGTTGAACTGATCAGAGATTTGTCATTCGTTAGTGTTTCTTCTGCTAATTTGGATAACTCAGTACCATTTGTGCCTCAAAGCCCTGTTGGGGTGCTGGATGCTGCAAGCTTGAGCTATAAAAGTGAAGAGTTAACCATTGGGTCATGTCCAAGTTCTTCCCATAATAGTCCAAATACTTAG 1044 0.4205 MAESLDSATSTLLCSENSNTCFADFEFNSADESEISPSWNHQNVNAYHHCLSSGSDGFQSLLGFPVQSEENLSLVIERERDYMPRDDYLKRLHSGDLDLSVRREALDWIWKAHTYYGFGPLSFCLSLNYFDRFLSIYELPRGKSWAVQLLAVACLSIAAKVEETEVPQSVDLQVGEPKYAFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLNKITYDQQNPAKSSISRSVQLILSTMRGIDFLEFKPSEIAAAVAISVSRELQAIEIDKAITCFGIVDKERVLKCVELIRDLSFVSVSSANLDNSVPFVPQSPVGVLDAASLSYKSEELTIGSCPSSSHNSPNT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1113 347 SUPERFAMILY Cyclin-like 64 201 IPR036915 -
Dere13g1113 347 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Dere13g1113 347 SMART Cyclin_C_2 204 340 IPR004367 -
Dere13g1113 347 Gene3D - 75 290 - -
Dere13g1113 347 FunFam D2/4-type cyclin 85 198 - -
Dere13g1113 347 SUPERFAMILY Cyclin-like 186 295 IPR036915 -
Dere13g1113 347 Pfam Cyclin, N-terminal domain 73 201 IPR006671 -
Dere13g1113 347 CDD CYCLIN_AtCycD-like_rpt2 205 292 - -
Dere13g1113 347 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Dere13g1113 347 Gene3D - 85 202 - -
Dere13g1113 347 FunFam D6-type cyclin 199 290 - -
Dere13g1113 347 PANTHER CYCLINS 72 294 IPR039361 -
Dere13g1113 347 SMART cyclin_7 107 195 IPR013763 -
Dere13g1113 347 Pfam Cyclin, C-terminal domain 205 304 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1113 Dere-ChrDere13 15407683 15409682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1113 67 273 Core Cell Cycle Gene Families AT5G65420 61.058 9.55e-95 281