Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1106 ATGTCAAATTCTAACCTGAATGGTAATTTCAAGTTTACGATAGACCCATGTTCTGAGAAACTGGGTTCGCTAATGTTTTCAGTAGGAAAAAACTTCGTTATCTTCATGGGGATGGTGGTTATTTGCAATGTCGTACATTACCTGCTAAAGCCATATTCACAACCACGCATTGCTTCTGACATACTTGTAGGACTAATTGTGGGGAACATAGGCTTCCTACGTAGTCAATATGAGCAATTCAACAAGACCTTTGGATTTATCATCGACGTAGGAATGATATGTTACATGTTTGCTTTGGGGATAGAAATGGATCCCTTTGTGCTTTTCAGAAAACCTACAAGAGATGCACAAGTTGCTTACGCAGGGATGATTTCCACATTCATCATAGCCTATGCTGCAACTACATTTTCATTCCTTCATTATTTTCCAAGCCAACACCAAATAGAGTTTACCCTTTCTTTCTCCACCCTTCTTTCAAGTACGGCATCGCCGGTGTTAACCCGTCTGCTGACAAACCTGAAAATAGGCAAGTCAGACATAGGAAAGCTTGTTATTGCAGGAGGAATGCACTCAGATTTCATATGCTCTTTGCTCATTTCAATTGGCTATATAGTTGTGCCAATGCACATGTATTGCAATAATTTGAACAATAAGAATCACACCAGAGGCATCATTGCTACAAGTTGTGCACTTTTCGGGCAGATACTATTCGCAGCCTTGGTTTCACCCTGGTTTATGAATTGGGTTAATAATGAAAACCCAGAAGGTAAACCCATGAAGGGCTCACATCTGGTACTCTCAATAGCCTTCATGGTATTAATTTGTGCCATATCGCCTATGTATAGTTATAGTCCAATTCTAAGTGCATTCATGGCTGGCATTTGTTTCCCTAGAGAAGGTAGAGTTTCTAAATGGGTTATCACCAGAATCAACTATCTGTTGACTACCATTTTCTTTCCCATATTTTTCTTGTGGATGGGATATGCAGCTGATTTCAGAAAGTTTGAGCCTGGAAAAGCAGGAACATGGGCAAGGCTATTGTTACTTACTGTGACAGTTATAGTTAGTAAAGTTGCAGGAACAATTCTTTATGGAGTAATAATGGGATTCAATTGGCATGAGTCTGTGGCAATTGGGTTGCTCCTCACCATCAAGGGCCCTTTTCATATCTACATGGCCATCAAAGCGATACAATGTGGAGTCAGTACTTCCACTGGCATTGTGATGATAATTGTAATATTCCTCACAGTTGTGCATTCCCCAGCAGTTGTGGCACATATCATCCGACGCGCAAAGAAAAGGGCACCTACTCATAGAATGGCCTTACAATTGCTTGATCCATTGAGGGAATTAAGGATACTTCTGTGTGTCCGTGGACCCCAACATCTTCCATCCGCAATCAACTTGATGGAGATCACAAGAGGCACAGCGGACCCTGGAATCCTGGTATATGTCACAGACATGATAGAGCTCACAGATGGAATTGCAGCCACAATAGAGGAAGTTCAAGGAGCAGACACTTTGATTGTGAAGGACAAGGGTGTCGTGGAAATGAGAGACAAGGTATCGTCCATGTTTCAAGCCTATGTGGAAGAAGATGGAGATGGTGTAACCCTTAGAAGAACCTTGGCTCTCTCAACTTTCAACAATATGGCCCATGACATTTCCACTTTAGCAGAGGATTTGATGATTGCCCTCATCATAATACCATTTCACAGGAGCCACCATGAAAATAGAACACCGGATGGAGGCAATTCAGGGTTCAGATATGTGAATCGAAAGATATTGGCAAGTGCTCCATGTTCTGTGGGGATTCTAGTGGACAGAGGCTTTGGATCCATTGAGAAGATTTCAAAATCTTCTGTATCAGTATATGTGGCAGTCATCTTCATTGGTGGGCAAGATGATAGAGAAGCACTTGCCTATGCCAGTAGAGTATCAAGGCATCCTGGAGTAAAACTAACAGTGATCAGGTTTTTGGTAGATACCAGTTCAGATGTCCTAATATTTACAGGCCACAAGGTCCCCTCCGTGAAGGAGGAGGAGGAGATACGACTAGATGATGAATGCTTCGCAAAGTTCTATGAAACACAAGTAGTGGGTGGTCGTATTTCCTATATGGAGAAGCATCTGGCAAATTCAGTTGAGACCTTTTCTACTCTAAGGTCATTTGAAGGGCAATATTCCCTTCTAATTGTAGGTAGAGGAGGTGGAGTGAACTCTATATTAACAAAAGGGATGAATGACTGGCAACAATGCCCAGAATTGGGACCAATTGGTGATGTTCTTTCAGGACCAGAGTTCTCCACGAACATCTCTGTATTGATCATCCAACAACACAGACTTAAAGGAGAAATAGATGGACTTGATGAAGACTTCTCTGTCATGTAG 2391 0.4187 MSNSNLNGNFKFTIDPCSEKLGSLMFSVGKNFVIFMGMVVICNVVHYLLKPYSQPRIASDILVGLIVGNIGFLRSQYEQFNKTFGFIIDVGMICYMFALGIEMDPFVLFRKPTRDAQVAYAGMISTFIIAYAATTFSFLHYFPSQHQIEFTLSFSTLLSSTASPVLTRLLTNLKIGKSDIGKLVIAGGMHSDFICSLLISIGYIVVPMHMYCNNLNNKNHTRGIIATSCALFGQILFAALVSPWFMNWVNNENPEGKPMKGSHLVLSIAFMVLICAISPMYSYSPILSAFMAGICFPREGRVSKWVITRINYLLTTIFFPIFFLWMGYAADFRKFEPGKAGTWARLLLLTVTVIVSKVAGTILYGVIMGFNWHESVAIGLLLTIKGPFHIYMAIKAIQCGVSTSTGIVMIIVIFLTVVHSPAVVAHIIRRAKKRAPTHRMALQLLDPLRELRILLCVRGPQHLPSAINLMEITRGTADPGILVYVTDMIELTDGIAATIEEVQGADTLIVKDKGVVEMRDKVSSMFQAYVEEDGDGVTLRRTLALSTFNNMAHDISTLAEDLMIALIIIPFHRSHHENRTPDGGNSGFRYVNRKILASAPCSVGILVDRGFGSIEKISKSSVSVYVAVIFIGGQDDREALAYASRVSRHPGVKLTVIRFLVDTSSDVLIFTGHKVPSVKEEEEIRLDDECFAKFYETQVVGGRISYMEKHLANSVETFSTLRSFEGQYSLLIVGRGGGVNSILTKGMNDWQQCPELGPIGDVLSGPEFSTNISVLIIQQHRLKGEIDGLDEDFSVM 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1106 796 Gene3D - 31 437 IPR038770 -
Dere13g1106 796 Pfam Sodium/hydrogen exchanger family 38 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere13g1106 796 PANTHER CATION/H + ANTIPORTER 37 781 - -
Dere13g1106 796 FunFam Cation/H(+) antiporter 28 29 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1106 Dere-ChrDere13 15298619 15303797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1106 33 796 Antiporter Super Family AT3G52080 50.704 0.0 776