Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1104 ATGGAGGAAGTTCAGGAGCCTCAAACTCAACCACTGGGTCAAGAAGATCAAAATGAAGTAATTACTGAAAGTTCTGCATTTGTTAAAGGGGAACCTCCACAAGCAGAGAGTAATCCTCCTAAAGTTGACTCTGAGGTCGAAATCCTTCATGAAAAAGTTACAAAACAAATAATTAAGGAAGGACATGGTCAGAAACCTTCCAAATATTCAACATGCTTCTTTCACTACAGGGCATGGACGGAAAGCACACAACACAAATTTGAAGACACATGGCATGAGCAACGACCAATAGAAATGGTATTAGGAAAAGAGAGAAAGGAAATGACTGGCTTGGGTATCGGTGTGGCCAGCATGAAAGCTGGTGAGCGTGCCTTACTGCATGTGGGCTGGGAATTAGGATATGGAAAGGAAGGCAGCTTCTCTTTTCCAAATGTTCCCCCTATGGCAGATTTAATTTATGAAGTTGAGCTCATAGGCTTTGACGAAACAAATAAAGGAAAAGCTCGCAGTGATATGACTGTGGAGGAAAGAATTGGTGCGGCAGATCAGAGAAAGATGGATGGAAATGCTTTGTTTAAAGAAGAAAAACTGGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGTGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGAGATATGGCTTTGGCTGTAAAGAATCCATGCCACCTTAACATGGCTGCATGTTTGATAAAGCTGAACCGTTATGAAGAAGCCATAGGACAATGTAGCCTTGTATTGACTGAGGAAGAAAATAATGTCAAGGCATTATTCAGACGAGGTAAGGCTAGGGCAGCCCTAGGCCAAACAGATGCTGCCAGGGAGGATTTTCAGAAAGCAAGGAAGTATGCCCCTGAAGATAAAGCAATTGCAAAAGAATTGCGATTGCTTGCTGAACATGACAAGGCTCTTTATCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGGCCTGAACCAAAACCTACGCGAAGTAATTTTCTGATTCTTATTTGGCAATGGTTGCTGTCAGTATTTCATCGCCTCATCATGTTCTTCAAGCGTGAAAGGCAAAAATCTGACTGA 1107 0.4164 MEEVQEPQTQPLGQEDQNEVITESSAFVKGEPPQAESNPPKVDSEVEILHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWTESTQHKFEDTWHEQRPIEMVLGKERKEMTGLGIGVASMKAGERALLHVGWELGYGKEGSFSFPNVPPMADLIYEVELIGFDETNKGKARSDMTVEERIGAADQRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSLVLTEEENNVKALFRRGKARAALGQTDAAREDFQKARKYAPEDKAIAKELRLLAEHDKALYQKQKEIYKGIFGPRPEPKPTRSNFLILIWQWLLSVFHRLIMFFKRERQKSD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1104 368 SUPERFAMILY FKBP-like 33 160 - -
Dere13g1104 368 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
Dere13g1104 368 SUPERFAMILY TPR-like 172 324 IPR011990 GO:0005515
Dere13g1104 368 MobiDBLite consensus disorder prediction 7 24 - -
Dere13g1104 368 Pfam Tetratricopeptide repeat 267 299 IPR013105 -
Dere13g1104 368 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 96 339 IPR039663 -
Dere13g1104 368 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Dere13g1104 368 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Dere13g1104 368 Gene3D - 37 162 IPR046357 GO:0003755
Dere13g1104 368 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 158 IPR001179 GO:0003755
Dere13g1104 368 MobiDBLite consensus disorder prediction 1 43 - -
Dere13g1104 368 FunFam Peptidylprolyl isomerase 166 294 - -
Dere13g1104 368 SMART tpr_5 232 265 IPR019734 GO:0005515
Dere13g1104 368 SMART tpr_5 181 214 IPR019734 GO:0005515
Dere13g1104 368 SMART tpr_5 266 299 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1104 46 334 Calmodulin-binding Proteins AT5G48570 32.770 1.30e-31 123