Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1095 ATGGAGCCAGAAAAGGGCACCGCCGGACGTGGATCCGCATCCGAATCCGGAAACTCACACTTCCTCGCCTTATGCACGTCCCTTCTTCGTCTCCGGAACTTCACTAGATGCCGCGAATTCGCTCTCCGCATCCGAAGATCCGACCCAAATATCTCCGACTCCGTCGATCGAATACTCGCAATCGCCGACGTTCATCTCGCCGCCGAGCACCGCCTCGGTAACAACCATTTCGACTGGTACTCTATTCTCCAACTCCGCCGTATTGACTCCGGAGACCACCAACTCATACGGAATCAATTTAAGAGGCTCGCGCAGCTCTTGAACCCAAACCGAAATGGGTATGCATTCTCAAACGAAGCATTCGTGCTTGTACGCGACGCGTGGCGCGTGCTTTCGGACCCAGAAAAGAGAGCCCGATATGAGCAGGAGATTTGCAACAGGGTACCCCAAGATCATCGCAAACAGAATAGTGCGAGCAAGCAAGAGGGTTCTCGTGATGTACCCAGAAATGGGCATAACGTGACTGTGGATGAACCAAAAGCCACATTTTGGACTCTCTGTCCTTATTGCTGGGTTTTGTACGAGTACGAGAAGATATACGAAGACTGCTCTCTGCGGTGCCAGAAATGCAGGAGGGTGTTTCAAGGGATACAGGTGACGCCTCCGGCGAATGACATGTTAGTGAAGGGGAAAGAGCAATACTATTGCTATTGTGCGCATGTACCTTTAAGGTATCCGCCGTCGCAACATTCAACGGCGGAGAAAAAATGTAATATTAATATGGAGATGCATTGGCGTATGGAAGCAAATAGTAAGAATGGAAAACCTTTTGTTGATATTCCTCATGATGATGATATGGGTGATTCATCGAAGTACTGCGGAATCGGAGAAGAGGAAAGGAGATTTCATGCAGAGCAGACAAGGACTGAAGGATTTTTTGGAGATATGGGAAATGGAAAGCGGCGGATGAGGGTAAAAACTGTGGCTAGAAGTACAAAGAAGATGACGGGGAACAGGTTGAGAAATCAGGCACATACTTCACGGGATAGGGATGTTGAATTGTCGGATTTGGATGCAGAAGATGGTGACTTGGACTATAAAGATGGAGTAGCAGTTGAACAAGTAAAGCTAATATTTGGTTTTGTTGAAGATATTGTGTTAACTGAGCATAATCTGTCGTTAAGAAGTTCGGCTTCTGGGAAATTTGGTTCTCTTCTGCAGTTTGTTCGGAACATTGTTCATCTTGATGATACCCAACGCAAAATTGCTATTGCTGGATAA 1281 0.4707 MEPEKGTAGRGSASESGNSHFLALCTSLLRLRNFTRCREFALRIRRSDPNISDSVDRILAIADVHLAAEHRLGNNHFDWYSILQLRRIDSGDHQLIRNQFKRLAQLLNPNRNGYAFSNEAFVLVRDAWRVLSDPEKRARYEQEICNRVPQDHRKQNSASKQEGSRDVPRNGHNVTVDEPKATFWTLCPYCWVLYEYEKIYEDCSLRCQKCRRVFQGIQVTPPANDMLVKGKEQYYCYCAHVPLRYPPSQHSTAEKKCNINMEMHWRMEANSKNGKPFVDIPHDDDMGDSSKYCGIGEEERRFHAEQTRTEGFFGDMGNGKRRMRVKTVARSTKKMTGNRLRNQAHTSRDRDVELSDLDAEDGDLDYKDGVAVEQVKLIFGFVEDIVLTEHNLSLRSSASGKFGSLLQFVRNIVHLDDTQRKIAIAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1095 426 CDD DnaJ 78 133 IPR001623 -
Dere13g1095 426 Gene3D DnaJ domain 65 166 IPR036869 -
Dere13g1095 426 SUPERFAMILY Chaperone J-domain 73 144 IPR036869 -
Dere13g1095 426 SMART dnaj_3 77 136 IPR001623 -
Dere13g1095 426 ProSiteProfiles dnaJ domain profile. 78 144 IPR001623 -
Dere13g1095 426 MobiDBLite consensus disorder prediction 328 354 - -
Dere13g1095 426 Pfam DnaJ domain 78 141 IPR001623 -
Dere13g1095 426 MobiDBLite consensus disorder prediction 150 173 - -
Dere13g1095 426 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 18 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1095 Dere-ChrDere13 15112743 15114372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1095 20 245 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.075 1.38e-45 162