Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1049 ATGGAACCCTTTTCTTGTTACATAGAAATACCATCTGATGGAACTGATGTCTGGGAATTGATATCAACTAGAGGAAATTTGGAAACAAGTTCACTGGAGCTCGCACTCGACCACCAAATCTGTGTATTGTTACTGAGTTCATGTCTAGAGGAAGCATATATGACTTTCTGCACAAACAAAAAGGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTGGTGATTGATGTTTCCAAGGGAATGAACTACTTGCACCAAAATAATATCATTCACAGGGACCTCAAGACTGTCAATCTGCTGATGGATGAAAATGAAGTGGTAAAGGTTGCAGATTTTGGGGTTGCCAAAGTGCAAACTTCGCTGAAACTGGAACATACTGCTGGATGGCTCCTGAGTTTGACTCTTTTATGCCTATTTACGTCACTGTTCTATTACCTTTCTGTTCTGCGAAAAGCATTTCTCTACTGCCATGAGGCGTCGTCCCTTGCCGATTTGGCTCTGAAACTTGTTTTAAATCATCATGTTTGCGGCTCTGTCTCTCGTGTTAGGGCTCTGTTTTCGTTCCTTCGAGCAGAGCAAGTTGCTCTTGATTCCCCTATACTTGAGCTAATGTAG 612 0.4167 MEPFSCYIEIPSDGTDVWELISTRGNLETSSLELALDHQICVLLLSSCLEEAYMTFCTNKKGVFKLPSLLKVVIDVSKGMNYLHQNNIIHRDLKTVNLLMDENEVVKVADFGVAKVQTSLKLEHTAGWLLSLTLLCLFTSLFYYLSVLRKAFLYCHEASSLADLALKLVLNHHVCGSVSRVRALFSFLRAEQVALDSPILELM 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1049 203 Pfam Protein kinase domain 38 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1049 203 Gene3D Transferase(Phosphotransferase) domain 1 29 134 - -
Dere13g1049 203 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 124 - -
Dere13g1049 203 SMART serkin_6 18 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1049 203 SUPERFAMILY Protein kinase-like (PK-like) 35 123 IPR011009 -
Dere13g1049 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1049 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1049 Dere-ChrDere13 13871798 13876348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1049 8 118 MAP Kinase Kinase Kinase AT4G35780 42.424 1.31e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere13g1049 Pkinase 2.2e-17 CL0016