Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1044 ATGGCAAACGTTATCCTAGGACAAGAAAAGGAGAAAACACCTGCCTATGGGTTAGCTACTAGAGACTCCTCAGGAGTTGTCTCTCCTTTTAACTTCCCCAGAAGGGCAAATGGTGATCATGATATCACCTTAGAAATATTGTATTGTGGGATTTGCCATGGGGATGTTCATTTTCTCAGGAATGAATTGGGCCACAGCATGTATCCCATGGTTGCCGGGCATGAGATTGTGGGGAAAGTAATAAAGGTGGGTCGTAGTGTCACAAAATTCAACATTGGTGATATTGCTGGTGTAGGTCCAGTTTCAGGTTCATGTCGTTCTTGTTCTAATTGCAACAAAGGCTGGGAAAGTTATTGCCCTAAGAGAATTTTCACCTATAATTCATATGACTATGATGGATCAATAACTCAAGGTGGATACTCCCATAAAACAGTGGCTGACGAGCATTTTGCCATTAAAATGCCCAGTGACTTGCCACTCGATGGTGCAGCACCATTGTTGTGTGCTGGAGTCGCAGTGTATAGTCCCATGAAGTACCATGGACTGTGTCATCCAGGTCAGCATTTGGGTGTGGTTGGCTTAGGTGGACTTGGCCATGTGGCTGTCAAGTTTGCTAAGGCTCTGAACATGAAGGTGACAGTGATAAGTACTTCCCCTGGAAAGAAGAAGGAAGCCTTGAAAAGGCTTGGAGCTGACGCTTTCTTGCTCAGTAATGACCAACAACAATTGCAGGATGGGAAGGACACGTTGGATGGAATCATTGACACTGTTTCGGGACCTCACTCTCTCCACCCATTATTAGATTTATTGAAAACAGGAGGAAAATTGATTATAGTCGGTGCATCAATCATACCACCCGAGTTACCAATTATGCCTTTGATGATGGGTAAGTTTATCTCTCATGGGGCTTACTCTGGGAGAAAGATAATTGCTGGAAGTGCAGCTGGAGGGATAAAAGAGAGCCAAGAGATGATTGATTTTGCAGCGAAGCACAATATCACAACAGATATTGAAGTTATTCCAATGGACTACGTGAAACACGGCTTTAGAACGAGTTGCCAAAAATGA 1068 0.4373 MANVILGQEKEKTPAYGLATRDSSGVVSPFNFPRRANGDHDITLEILYCGICHGDVHFLRNELGHSMYPMVAGHEIVGKVIKVGRSVTKFNIGDIAGVGPVSGSCRSCSNCNKGWESYCPKRIFTYNSYDYDGSITQGGYSHKTVADEHFAIKMPSDLPLDGAAPLLCAGVAVYSPMKYHGLCHPGQHLGVVGLGGLGHVAVKFAKALNMKVTVISTSPGKKKEALKRLGADAFLLSNDQQQLQDGKDTLDGIIDTVSGPHSLHPLLDLLKTGGKLIIVGASIIPPELPIMPLMMGKFISHGAYSGRKIIAGSAAGGIKESQEMIDFAAKHNITTDIEVIPMDYVKHGFRTSCQK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1044 355 Gene3D - 20 349 - -
Dere13g1044 355 Gene3D - 169 335 - -
Dere13g1044 355 Pfam Alcohol dehydrogenase GroES-like domain 40 154 IPR013154 -
Dere13g1044 355 Pfam Zinc-binding dehydrogenase 196 297 IPR013149 -
Dere13g1044 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 333 IPR036291 -
Dere13g1044 355 SMART PKS_ER_names_mod 19 331 IPR020843 GO:0016491
Dere13g1044 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Dere13g1044 355 PANTHER ALDEHYDE REDUCTASE 11 347 IPR047109 GO:0016616
Dere13g1044 355 SUPERFAMILY GroES-like 22 187 IPR011032 -
Dere13g1044 355 FunFam Cinnamyl alcohol dehydrogenase 169 335 - -
Dere13g1044 355 CDD CAD1 17 349 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1044 Dere-ChrDere13 13800833 13802660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1044 15 345 Monolignol Biosynthesis Gene Families AT4G37990 59.819 2.69e-124 360