Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1043 ATGTCGAACCTTTTCGCAGCAGAAGAAAAGGAAAGCACAGAAGCCTATGGATGGGCAGCCAGAGACACCTCAGGAATCCTCTCTCCCTTCCACTTTACTCGAAGGGCAAATTGTGAGACTGATATCACCATCAAGATATTGTATTCTGGGATTTGCCATACCGACATTCATTTTCTCAAGGATGACTTCGGCATGACCACATATCCCATTGTTCCCGGGCACGAAATTGTGGGCGAAGTGATCAAAGTGGGTCATGGCGTCACAAAATTCAGAGTGGGTGACATAGCCGGTTGTCCCCAAATGGTCTTAACCTATAGCTCGCGAGACCGTGACGGATCGGTAACCCAAGGTGGCTACTCCGATAAGATTGTGGTGGACGAGCACTTCGCAGTGGTAATTCCGAAGGCTTTGGCTCTAGATGGAGTAGCCCCATTGCTTTGTGCTGGAATCACAGTGTATAGCCCCATGAAGAGTTTTGGACTGGCTCAGCCTGGAATGCACTTGGGTGTGGTAGGCCTCGGTGGACTTGGACACATGGCTGTCAAGTTTGCCAAAGCTTTTAGTATGAAGGTCACGGTGATAAGTACTTCTCCTCACAAGAAGAAGGAAGCGTTGGAACGTTTTGGTGCTGACGAGTTCATAGTCAGCAAAGACCAACAACAATTGCAGGATGCCATGGGCACAATGGACGGAATACTTGACACAGTTTCGGGGCCTCATTCCCTCTTACCATTGATTGGTTTGCTGAAGACACATGGAAAGTTGATTTTGCTGGGAAGGAAGACAATTTGTGGGAGTGCTGGAGGAGGGACAAAAGACATGCAAGAAATGATGGATTTTGCAGCAAAGCATAATATTACTTCGGACGTGGAGGTCATTCCAATGGATTATGTAAACAATGCCTTACAACGACTTGCAAACAATGATATTAAGTACCGATTTGTGATTGACGTGGCAAATACCATCAACTCTCCAGTTACAAATTGA 987 0.4661 MSNLFAAEEKESTEAYGWAARDTSGILSPFHFTRRANCETDITIKILYSGICHTDIHFLKDDFGMTTYPIVPGHEIVGEVIKVGHGVTKFRVGDIAGCPQMVLTYSSRDRDGSVTQGGYSDKIVVDEHFAVVIPKALALDGVAPLLCAGITVYSPMKSFGLAQPGMHLGVVGLGGLGHMAVKFAKAFSMKVTVISTSPHKKKEALERFGADEFIVSKDQQQLQDAMGTMDGILDTVSGPHSLLPLIGLLKTHGKLILLGRKTICGSAGGGTKDMQEMMDFAAKHNITSDVEVIPMDYVNNALQRLANNDIKYRFVIDVANTINSPVTN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1043 328 Pfam Alcohol dehydrogenase GroES-like domain 40 97 IPR013154 -
Dere13g1043 328 FunFam Cinnamyl alcohol dehydrogenase 148 288 - -
Dere13g1043 328 SUPERFAMILY GroES-like 25 165 IPR011032 -
Dere13g1043 328 SMART PKS_ER_names_mod 25 316 IPR020843 GO:0016491
Dere13g1043 328 Gene3D - 18 97 - -
Dere13g1043 328 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Dere13g1043 328 Gene3D - 98 318 - -
Dere13g1043 328 FunFam Putative cinnamyl alcohol dehydrogenase 6 289 318 - -
Dere13g1043 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 286 IPR036291 -
Dere13g1043 328 PANTHER ALDEHYDE REDUCTASE 9 321 IPR047109 GO:0016616
Dere13g1043 328 CDD CAD1 17 317 IPR047109 GO:0016616
Dere13g1043 328 Pfam Zinc-binding dehydrogenase 175 260 IPR013149 -
Dere13g1043 328 Gene3D - 148 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1043 Dere-ChrDere13 13781151 13783639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1043 11 322 Monolignol Biosynthesis Gene Families AT2G21890 51.714 5.17e-120 348