Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1042 ATGGTCACCAAATACGTCAGCCCAGCCCATCAGAAGTCTCCAGCATCCGTATATAAGTCACATGCACCACTCGGGCTCGCTACCACATTGAGCAAAAGCAATTCTCCTTTCTCCGTTATCATTCGTGCTGCGTCTCCCCATTCCTACCTTCGTTTTCTTGAGAGTGAATTAGATCGTCAGATTAAAACGGCGTTACAGCCAGAGATGGAGCATCCCAGGAGGGCTTTCGGATGGGCTGCCAGGGACACATCTGGGGTTCTCTCTCCTTTCAAGTTCTCTAGAAGGGCAACGGGAGAGAAGGATGTGACATTCAGAGTGTTGTACTGTGGGATATGCCACTCGGACCTGCACATGATTAAGAATGAGTGGGGCACCAGTACTTATCCAATTGTACCTGGGCATGAAATTGTGGGTGAAGTAACAGAGGTGGGAAGCAAGGTACAGAAGTTCAAAGTTGGAGACAAGGTAGGTGTGGGATGCATGGTCGGTTCATGCCATTCGTGCCAAAGCTGTAAAGACAATCTTGAGAATTACTGTCCAAAGATGATTCTGACGTGCGGTGCCAAGTATGTGGATGGCACCATCACATATGGAGGATACTCTGACTTAATGGTTGCAGATGAGCACTTTGTGGTTAGCATTCCAGAAAGCCTTCCTCTTGATGCTGCTGCTCCTCTCCTCTGTGCTGGGATCACTGTTTATAGCCCTTTGAGGTATTTTGGACTTGACAAGCCTGGTCATCAAGTGGGTGTGGTTGGTCTGGGTGGGCTAGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGTGCTAAGGTGACAGTAATTAGTACATCACCTAACAAAAAGAAGGAAGCAATTGAACGTCTCGGAGCTGACTCCTTTATCGTCAGCCGGGAGCAAGATCAGATGCAGACTGCAATGGGGACCTTGGATGGTATTATTGACACTGTTTCTTCTGTCCATCCTCTCGTGCCTTTGATTGGTTTGTTGAAACCTCATGGAAAACTTGTTATGGTTGGTATTCCAGAGAAGCCTCTAGAGCTGCCAGTCTTTCCTTTACTAATGGGGAGGAAGTTAGTGGCTGGGAGTTGCCTTGGAGGGATGAAGGAGACACAAGAAATGGTTGATTTTGCTGCTAAGCACGATGTGAAACCTGACATTGAGATTCTTCCAATGGATTATGTGAATGAGGCAATGGAGCGTCTGGCTAAAGCAGATGTGAAGTATCGATTTGTCATTGACATTGGGAACACATTGAAGCCAACCTCTTAA 1272 0.4709 MVTKYVSPAHQKSPASVYKSHAPLGLATTLSKSNSPFSVIIRAASPHSYLRFLESELDRQIKTALQPEMEHPRRAFGWAARDTSGVLSPFKFSRRATGEKDVTFRVLYCGICHSDLHMIKNEWGTSTYPIVPGHEIVGEVTEVGSKVQKFKVGDKVGVGCMVGSCHSCQSCKDNLENYCPKMILTCGAKYVDGTITYGGYSDLMVADEHFVVSIPESLPLDAAAPLLCAGITVYSPLRYFGLDKPGHQVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIERLGADSFIVSREQDQMQTAMGTLDGIIDTVSSVHPLVPLIGLLKPHGKLVMVGIPEKPLELPVFPLLMGRKLVAGSCLGGMKETQEMVDFAAKHDVKPDIEILPMDYVNEAMERLAKADVKYRFVIDIGNTLKPTS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1042 423 FunFam Putative cinnamyl alcohol dehydrogenase 6 386 415 - -
Dere13g1042 423 FunFam Uncharacterized protein 78 228 - -
Dere13g1042 423 Pfam Alcohol dehydrogenase GroES-like domain 100 213 IPR013154 -
Dere13g1042 423 Gene3D - 78 415 - -
Dere13g1042 423 Gene3D - 229 385 - -
Dere13g1042 423 CDD CAD1 76 414 IPR047109 GO:0016616
Dere13g1042 423 Pfam Zinc-binding dehydrogenase 256 379 IPR013149 -
Dere13g1042 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 218 384 IPR036291 -
Dere13g1042 423 SUPERFAMILY GroES-like 82 247 IPR011032 -
Dere13g1042 423 SMART PKS_ER_names_mod 85 413 IPR020843 GO:0016491
Dere13g1042 423 FunFam Cinnamyl alcohol dehydrogenase 229 385 - -
Dere13g1042 423 PANTHER ALDEHYDE REDUCTASE 67 418 IPR047109 GO:0016616
Dere13g1042 423 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 133 147 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1042 Dere-ChrDere13 13770777 13774879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1042 73 422 Monolignol Biosynthesis Gene Families AT4G37990 71.429 1.59e-173 488