Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1041 ATGACGAAGTCGCCAGAACAAGAACACCCAGTAAGGGCATTTGGATGGGCTGCTACACACCCTAATGGCCATCTCTCCCCCTTCAACTTCTCCAGAAGGGCTACCGGCGATCATGATGTAAGGTTTAAGGTATTGTATTGTGGAATATGCCACTCGGATCTTCACGCTAAGAACAATGATTGGGGCTCCTCAGTCTACCCAATTGTTCCAGGGCATGAGTTTGTGGGTGAAGTGACGGAAGTGGGAAAGGAAGTGAAGAAAGTGAAGGTTGGAGACAAAGTAGGAGTGGGATGCATGGTAGGTGCATGCCATAGCTGCGACGAGTGCGACAATGACCTTGAGAACTACTGTCCCAACATGATCCTAACCTACAACTCCATATACCATGATGGAACTATCACTTATGGAGGCTACTCCGACCACATGGTCGTCCACCACCGCTACATTGTTCGCCTCCCGGAAACCATGCCGCTCGACGCCGCTGCTCCTCTGCTTTGCGCCGGCATCACTGTCTATAGTCCTTTGAAATACTACGAACTTGCTGAGCCTGGGAAGCACGTGGGTGTGGTTGGCCTTGGTGGTCTTGGCCATCTTGCTGTCAAATTTGCCAAGGCTTTTGGTGCTAAAGTTACTGTCATTAGCACCTCAGCTAGCAAGAAGGACGAAGCACTTCACCACCTTGGAGCTCATTCGTTTTTGGTTAGCCGTGACCAACACCAAATGCAGGCAGCCAAGGGAACACTGGATGGCATTATCGACACAGTGTCTGCTGTGCACCCTTTGTCGCCATTAATTGGTTTACTGAAGTTGCAAGGAAAGCTTGTGATGGTGGGTGCACCTGAGAAGCCAGTTGAGCTTGTAGTCTTTCCTGATCTTGTAATGGGAAGGAAGATGGTAGGAGGGAGTGCCATAGGAGGAATGAAGGAAACTCAAGAAATGATTGACTTTGCTGCAGAGCACAACGTGACCGCAGATATTGAGGTAATCCCAATGGATTATGTGAACACTGCCATGGATCGACTTGCCAAAGCCGACGTTAGATATCGTTTTGTAATTGACATTGGCAACACATTGGCTGCTACTAGGCCTTGA 1092 0.4918 MTKSPEQEHPVRAFGWAATHPNGHLSPFNFSRRATGDHDVRFKVLYCGICHSDLHAKNNDWGSSVYPIVPGHEFVGEVTEVGKEVKKVKVGDKVGVGCMVGACHSCDECDNDLENYCPNMILTYNSIYHDGTITYGGYSDHMVVHHRYIVRLPETMPLDAAAPLLCAGITVYSPLKYYELAEPGKHVGVVGLGGLGHLAVKFAKAFGAKVTVISTSASKKDEALHHLGAHSFLVSRDQHQMQAAKGTLDGIIDTVSAVHPLSPLIGLLKLQGKLVMVGAPEKPVELVVFPDLVMGRKMVGGSAIGGMKETQEMIDFAAEHNVTADIEVIPMDYVNTAMDRLAKADVRYRFVIDIGNTLAATRP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1041 363 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Dere13g1041 363 PANTHER ALDEHYDE REDUCTASE 5 357 IPR047109 GO:0016616
Dere13g1041 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Dere13g1041 363 Gene3D - 167 324 - -
Dere13g1041 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Dere13g1041 363 SMART PKS_ER_names_mod 23 352 IPR020843 GO:0016491
Dere13g1041 363 FunFam probable cinnamyl alcohol dehydrogenase 16 174 - -
Dere13g1041 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Dere13g1041 363 Pfam Zinc-binding dehydrogenase 194 318 IPR013149 -
Dere13g1041 363 Gene3D - 16 354 - -
Dere13g1041 363 CDD CAD1 14 353 IPR047109 GO:0016616
Dere13g1041 363 FunFam Cinnamyl alcohol dehydrogenase 167 324 - -
Dere13g1041 363 SUPERFAMILY GroES-like 18 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1041 Dere-ChrDere13 13731383 13735409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1041 12 358 Monolignol Biosynthesis Gene Families AT4G37990 68.588 3.75e-161 454