Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1039 ATGAAGCTTCTTTCTCTTCCCCCTTTGGAGGTCATAGGCGGCATCAAAGTTACTGATGTTATTCATGATGCGCAATGGGATCATTCTCTCGTGGAACCTTGGCTTCAGCAGGTTGAGATTTTGGCCATCAAGAAATACTTGTCTTGTCTAACTCATGATGATAGGCTATATGGATGGATGCTAAAGATCAGGGCTTTGCAAAGGCTTTTTGCCTGCGAAGAAGGTTTTGTGGAGAAGGAAGTACACCCTTACCAGTGTCACACGATTCGACACTTGGCTACTATTTTATGTGATTATGGTTTAGATGATGAGATGAATGTATATGTGGCATCTCAAGCTGCTACTGAATTGCGGAGTCATGGAACACTTAACCTACGAGCCGATTTTGTAAGGGTTTCATTGTCATGCCCAGATGGCGATGTCCTTGGAATATCATATAATGGAATCGATAACCTTCTTGAAGCTCGTAACCATCCTGATGATAGAGGAGTCCAAGGGACAAAGTTTTATGTGATAATGGAAACCGCAGATCAAGTTGAAGTTTCTTTCTTGACCATGTGGGATTCTTCCATGTCCGAAGAAAGCATCCCAATGAACATTGATAAAAGGTATATTTTACGTAGAGGCAGTTCAGGATTATATTCATATGCCGTGTATGAGCGTTTAGATGGTTTTCCTTCCATGAAGATGGATGTCCTGAGGCTCGTCTACAAGCCCCGACAAGACATGTTTCACTTCATGGCTAAATCAGACGACAGGCAGAGAGATATGCCCACCGCCTGA 783 0.4291 MKLLSLPPLEVIGGIKVTDVIHDAQWDHSLVEPWLQQVEILAIKKYLSCLTHDDRLYGWMLKIRALQRLFACEEGFVEKEVHPYQCHTIRHLATILCDYGLDDEMNVYVASQAATELRSHGTLNLRADFVRVSLSCPDGDVLGISYNGIDNLLEARNHPDDRGVQGTKFYVIMETADQVEVSFLTMWDSSMSEESIPMNIDKRYILRRGSSGLYSYAVYERLDGFPSMKMDVLRLVYKPRQDMFHFMAKSDDRQRDMPTA 260
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1039 260 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 125 259 - -
Dere13g1039 260 Pfam Rhamnogalacturonate lyase family 119 259 IPR010325 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g1039 Dere-ChrDere13 13706628 13715822 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1039 130 258 Polysaccharide Lyase AT1G09910 46.575 3.67e-38 139