Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1037 ATGGCTTCCTCTGCTTCTTTCCTCTTCATCCTCTTCACTCTGTTCTTGTTACTCCTCAACACAGTAGACTCAGTCTCCTTCAACTTCGACAAATTCCAACCTAACATGAATCTAATAAACTTCCAAGGTGATGCCTTCTCGTCGGATGATGTTCTTCAGCTCACAAAGAACCGACGCGGCCCCATCACGAGCAGTGCCGGTCGAGCCTCGTACGCCGAACCAGTGCATGTGTGGGACAGAACAACAGGGAAACTCACAGACTTCGCCACCCATTTTTCCTTTGTCATCAAAGCAGTCGATACAAGAGGGTACGGTGATGGAATGTCCTTCTTCCTTTCGCCTTTTCAATCTGACATCCCAAACGGTTCAGCTGGAGGGTTCCTTGGTCTGTTCAATTCAGAATCTGCATTCAACACTGCCAAGAATCAGATAGTTGCGGTTGAGTTCGACAGCTTTAACAACTCGTGGGATCCAGCCTCAGACCATGTCGGAATCAACGTGAATTCCATCGAATCTGTTGCGTTTGCGAAATGGAAGAGCAGCATTAAGAATGGGAAAACAGCTAATGCTTGGGTAGAATATAATTCCACCACTAAAAATCTTAGTGTGTTCCTCGCTTATGCTGATAAACCAGTGTTTCTGGGTAATTCTAGCGTTTGGCATGTCATTGATTTGCGGAAAGTTTTGCCAGAGTGGGTTAGAGTTGGATTTTCTGCTGCCACAGGTGATTGGGCTGAAATACACAACATTATCTCTTGGTCGTTCAATTCGACCTTGGAAAGTGAAGCCACTGAAAATAAGAACAGGGTTGGCTTGGGGATTGGTTTAATTGCTGGATTTGGTTCTCTTACTTGTGTAGCAGGTGTTTTATGGTTCACTCTTTGGAGAAGAAAACATAACATGAAGAAGAAGAAGAAGGAAGAAAGTACAGGGATTGATGCTTCCATGGATGACGAGTTTGAGAAAGGAACTGGACCAAGGAGATTCACCTACCAGGAACTAAGTCGTGCGACGAATGATTTTGCAGAAGCAGGAAAGCTAGGAGAAGGAGGATTCGGAGGTGTTTACAAAGGTTTTCTCATAAACGAAAGTCTACAAGTTGCTGTGAAGAGAGTTTCAAAAGGGTCAAAACAGGGGAAAAAGGAATACATCTCAGAAGTGAGAATCATCAGCAGGTTGAGACACAGAAACTTGGTTCAACTCATTGGGTGGTGCCATGAACAAGGTGAGTTCCTTCTTGTTTATGAGTTCATGCATAATGGAAGTCTTGACTCGCACCTATTTGGAAACAGAACCACACTAAGTTGGCCACAAAGGTACAAAATAGCCTTGGGTTTGGCATCTTCACTTCTGTATCTGCATGAAGAATGGGAACAATGTGTAGTACACAGAGATATTAAGTCGAGTAATGTCATGTTAGACGCAAACTTCATTGCCAAGTTAGGTGACTTTGGTCTTGCAAGGCTAGTTGACCATGAACTTGGGTCTCAAACCACAGTTCTAGCAGGCACAATGGGGTACCTAGCCCCAGAGTGTGTGACCACAGGAAAAGCAAGTAAGGAGTCTGATGTGTACAGCTTTGGGGTAGTAGCCCTGGAAATCACATGTGGGAGAAGACCAGTGGAAGTAAGAGCTGAACCTAACAAGGTAAGGCTTGTGCAGTGGGTGTGGGACCTATATGGGAAAGGGAAGGTTCTAGAAGCTGCTGATGAGAGACTAATGTTGGAGTCTGATGAGGGGCAAATGGAATGCTTGATGATTGTAGGGTTGTGGTGTTGCCATCCTGATCAGAGCATGAGACCTTCCATAAGGCAAGTCATAAATGTGCTCAATTTTGAAGCTGCTTTGCCAAGTCTTCCATCAAAGTTGCCTGTTCCTATGTACTGTGCACCTCCCATGGATATGTGCAGATTCTCGTACACTTCGTCTGGCGTCACAGCCTCAACCAAAGGCTCCTCCTCGTACTCATCAGTGTCAGTAGGGTCCAGAAAGTCTCTCTCACAATGCTGA 2010 0.4512 MASSASFLFILFTLFLLLLNTVDSVSFNFDKFQPNMNLINFQGDAFSSDDVLQLTKNRRGPITSSAGRASYAEPVHVWDRTTGKLTDFATHFSFVIKAVDTRGYGDGMSFFLSPFQSDIPNGSAGGFLGLFNSESAFNTAKNQIVAVEFDSFNNSWDPASDHVGINVNSIESVAFAKWKSSIKNGKTANAWVEYNSTTKNLSVFLAYADKPVFLGNSSVWHVIDLRKVLPEWVRVGFSAATGDWAEIHNIISWSFNSTLESEATENKNRVGLGIGLIAGFGSLTCVAGVLWFTLWRRKHNMKKKKKEESTGIDASMDDEFEKGTGPRRFTYQELSRATNDFAEAGKLGEGGFGGVYKGFLINESLQVAVKRVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMHNGSLDSHLFGNRTTLSWPQRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFIAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGVVALEITCGRRPVEVRAEPNKVRLVQWVWDLYGKGKVLEAADERLMLESDEGQMECLMIVGLWCCHPDQSMRPSIRQVINVLNFEAALPSLPSKLPVPMYCAPPMDMCRFSYTSSGVTASTKGSSSYSSVSVGSRKSLSQC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1037 669 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
Dere13g1037 669 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1037 669 MobiDBLite consensus disorder prediction 646 669 - -
Dere13g1037 669 MobiDBLite consensus disorder prediction 305 324 - -
Dere13g1037 669 FunFam L-type lectin-domain containing receptor kinase IX.1 23 268 - -
Dere13g1037 669 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Dere13g1037 669 Gene3D Transferase(Phosphotransferase) domain 1 418 631 - -
Dere13g1037 669 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1037 669 Gene3D - 22 274 - -
Dere13g1037 669 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Dere13g1037 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Dere13g1037 669 PANTHER - 21 620 - -
Dere13g1037 669 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1037 669 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Dere13g1037 669 SUPERFAMILY Protein kinase-like (PK-like) 325 636 IPR011009 -
Dere13g1037 669 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Dere13g1037 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 262 IPR013320 -
Dere13g1037 669 FunFam Lectin-domain containing receptor kinase A4.3 418 630 - -
Dere13g1037 669 CDD lectin_legume_LecRK_Arcelin_ConA 25 259 IPR001220 GO:0030246
Dere13g1037 669 CDD STKc_IRAK 355 611 - -
Dere13g1037 669 Pfam Legume lectin domain 25 267 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1037 Dere-ChrDere13 13682475 13684484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1037 10 628 Receptor kinase-like Gene Family AT5G10530 52.050 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere13g1037 Pkinase 1.6e-49 CL0016