Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1033 ATGTCTCCTTTTGATTCTGGGAACGTGAACATGATATACGAAGGATCTGCGGCACCTCGTGTAGGAGCTGTTGAATTCAACATCTATGAAAAGTACACAAGTCAAGTTGGAAGAGCCATCTACGCCCAAAGGGTCTTACTGTGGGACTCAAGCACAGAACGACTCACCGACTTCACCACTCACTATGCCTTCATTATTGACACTCGAGGTCAATCTCATTACGGCCATGGACTCTGCTTCTTCCTTGCTTCTACTGATTTTGAAATCCCACCAAATTCTGCAGGTGGCTTTCTTGGCCTTTTCAATACCTCAAGCATTGGCTCGTCCCAGAACCAACTTGTTCATGTGGAGTTCGATTCTTTTCCAAATCCAGAATGGAACGAGACTACTGAGCATGTGGGAATCAACAGCAACTCGATTGCTTCATCATTATCCACAGTTTGGAATGCTAGTCTGCACAGTGGTGACACTGCAGATGTATGGATTACCTACAACTCCACAACAAAGAATTTGAGTGTATCATGGGCATACCAGAACACCCCAAATCCACGAGAGAAGACTCATCTTTCTTATCAAATTGATCTAATGAAGGTACTGCCTGAATGGGTGATTATTGGATTTTCTGCAGCGACGGGTACGAATGTTGAACGCCATACCCTTCTTTCTTGGGAGTTCAGCTCAACTTTGGATAAACCTGAAGAAAATAAAAATAAGACAAAGAAACTGGTAATTATTCTAACAGTTTCAGGCGTTGTTTCTATAGTTGGAGGAGCAGCTGCAGCATATGTGTTGCTTAGGAGGAAGACCAAAATGAAAAGCAACAAAGAACAAGAAGGTATGAACTTGACATCAATGAATGATGACCTTGAGAGAGGAGCAGGACCTAGAAGGTTCTATTACAGAGAGCTTGCTATGGCAACCAACAATTTCTCCAGGGACAGGAAATTAGGACAAGGTGGGTTTGGTGCTGTCTACAGAGGTTACTTAGCAGATCTAGATTTGTCAGTTGCAGTGAAGAAAATATCAGACGGATCTAGACAAGGGAAAAAGGAGTACGTAACAGAAGTAAAGATCATTAGTCAACTAAGACATCGAAATCTCGTGCAGCTCATAGGTTGGTGCCATGACAAAGGTGAGTTCCTACTTGTTTACGAGTTCATGCCTAACGGTAGCCTTGATGCTCATTTGTTTGGGAAGAAAACCCCTCTTTCATGGAACGTGAGGCACAAAATAGCTCTTGGATTGGCCTCAGGACTGCTCTATCTTCACGAAGAATGGCAGCAATGTGTGGTGCACAGGGATATCAAGCCAAGCAATGTGATGCTGGATTCAAGTTTCAATGTTAAACTTGGTGACTTTGGGTTGGCTAAACTCATGGACCATGAGCTAGGAACCCAGACAACTGGGCTAGCTGGAACCATAGGGTATATCGCTCCTGAATATGTGAGCACAGGTAGAGCCAGCAAAGAGTCTGATGTATATAGCTTTGGGGTAGTTGCCCTAGAGATTGCCACTGGGAGGAAGGCAAATGAACTTATGGAGGACAAAGACGGAGAAAAGGGATTGATTGAGTGGGTTTGGAATCACTATGGGAGAGGAGAGCTGGTGGTGGCCATGGATGAGAAACTGCGAAAGGAGTATGATGAGAGACAAGTAGAGAGTTTGATGATTGTAGGGCTGTGGTGTGCTCACCCTGATAAGAATTTGAGACCATCAATAAGGCAAGCAATTCAAGTGCTTCTTTTTGAGGCAGCCTTACCAAACCTTCCACCCATGAAGCCCATTCCAATATATCATCATCATGCTCCTGCACCAATCGTGAGCTCTTCGGAAGCTTCCATGACTGTAACACTTCGAACGGGTCGTTGA 1869 0.443 MSPFDSGNVNMIYEGSAAPRVGAVEFNIYEKYTSQVGRAIYAQRVLLWDSSTERLTDFTTHYAFIIDTRGQSHYGHGLCFFLASTDFEIPPNSAGGFLGLFNTSSIGSSQNQLVHVEFDSFPNPEWNETTEHVGINSNSIASSLSTVWNASLHSGDTADVWITYNSTTKNLSVSWAYQNTPNPREKTHLSYQIDLMKVLPEWVIIGFSAATGTNVERHTLLSWEFSSTLDKPEENKNKTKKLVIILTVSGVVSIVGGAAAAYVLLRRKTKMKSNKEQEGMNLTSMNDDLERGAGPRRFYYRELAMATNNFSRDRKLGQGGFGAVYRGYLADLDLSVAVKKISDGSRQGKKEYVTEVKIISQLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDAHLFGKKTPLSWNVRHKIALGLASGLLYLHEEWQQCVVHRDIKPSNVMLDSSFNVKLGDFGLAKLMDHELGTQTTGLAGTIGYIAPEYVSTGRASKESDVYSFGVVALEIATGRKANELMEDKDGEKGLIEWVWNHYGRGELVVAMDEKLRKEYDERQVESLMIVGLWCAHPDKNLRPSIRQAIQVLLFEAALPNLPPMKPIPIYHHHAPAPIVSSSEASMTVTLRTGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1033 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Dere13g1033 622 CDD lectin_legume_LecRK_Arcelin_ConA 4 229 IPR001220 GO:0030246
Dere13g1033 622 SUPERFAMILY Protein kinase-like (PK-like) 294 612 IPR011009 -
Dere13g1033 622 ProSitePatterns Protein kinases ATP-binding region signature. 316 340 IPR017441 GO:0005524
Dere13g1033 622 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 239 IPR013320 -
Dere13g1033 622 ProSitePatterns Legume lectins alpha-chain signature. 199 208 IPR000985 -
Dere13g1033 622 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1033 622 FunFam L-type lectin-domain containing receptor kinase IX.1 1 238 - -
Dere13g1033 622 FunFam Lectin-domain containing receptor kinase A4.3 387 600 - -
Dere13g1033 622 Gene3D Transferase(Phosphotransferase) domain 1 387 601 - -
Dere13g1033 622 Pfam Legume lectin domain 4 239 IPR001220 GO:0030246
Dere13g1033 622 Gene3D Phosphorylase Kinase; domain 1 295 386 - -
Dere13g1033 622 Gene3D - 1 253 - -
Dere13g1033 622 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1033 622 FunFam L-type lectin-domain containing receptor kinase IX.1 295 386 - -
Dere13g1033 622 CDD STKc_IRAK 316 580 - -
Dere13g1033 622 Pfam Protein kinase domain 311 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1033 622 PANTHER - 34 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1033 Dere-ChrDere13 13630896 13632764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1033 1 599 Receptor kinase-like Gene Family AT5G10530 59.802 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere13g1033 Pkinase 8.2e-51 CL0016