Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1023 ATGGCCAAGACCATAATGATGGAGAAATTGGATATTTGGCTATTCAGACTTGCCTTGGTATATGTCTTTTGCCTTCTTGTGTTCATCAGATCATCTTCTGCAAGTGAAGGATTTGTCAGCATAGCTTGCTGTGCTGATTCAAGATACACAGATCCAGAGACCAACTTGAGTTACATATCAGATTACGCTTGGTTTCCTGATAGAACAAGTTGCAGAAGCTTGACTAAGCAGAAGGCAAACCATACAGGCGATGAAAGAGCTAGAGTGTTCGATGTTATAGATAAGGGAAAGAGATGTTACAGCCTGCCAACGATTAAGGGCGAAGTGTATCTGTTGAGGGGCACATTTCCATTTGACTGGTCACTTCCGGATTTATCCTTTGATGTTTCAATTGCAGTAACATCGTTAGGTTCAGTAAGACCATTCCAGGACTTTGAAATAATAGAGGGAATTTTCAGAGCTTCTAGGAACTACATAGATTTCTGCTTAGTGAAGGAGGAGGAAGATGGGAATCCTTATATTTCGGAGCTTGAATTAAGGCCAGTCCATGAAGAGTATCTGCAGGGTTTACCTTCTAGTGTTGTAAAACTGATCAGCAGAAATAAACTTGGGGGCACGAAAAATGACATCAGGTATCCAACAGACCCAAACGACAGAATCTGGAAAGAAACTTCAAGTTCATCATCAGCATCTTCCATATCATCATTTAATGTCAGCATTTCCGGCCAGATTGCTAGTGTAACTCCTCCTCTTCAAGTCCTACAAACAGCTCTCACTCATCCTGAGAGATTGGAGTTCATTCACATTAGCCCCGAGACATGGAACGACGAGTACCGTCTGTTCCTCTACTTCCTTGAATTAAACGACACCGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTCAACGGTGAGATTAAGGAGAGGAGCTTTGAAATTTTGGCTGGTGGGTCGAACTATAGACACACTGTATTAAACGTTTCGTCAAATGGGCCAATCAATTTAACCCTGGTAAAGGCATCTAGGTCTGAGTATGGACCCCTTTGTAATGCATATGAAATTCTGGAGGTGCTTCCATGGATGAAAGAGACAAATGAATCAGACTGTAAGCGTATTTCAAAGTGTTGTTATCTTCTTCCTCAGACTCTCTGCTTCTCTCTCACAAGCACCATTTTTCTTCCTTCAGTGAAAGAAATGTCGAAGGTGGCAGAAGAATTGATGGTGCAAAACCGAGGCAACAAAGCGCTGGAGAGTTGGAGTGGAGACCCATGCATGCCTTTTTCATGGAAAGGGGTAGAATGTGATCGTTTAGATGGTTCAACTGTTATCAATAAGCTGGATGTTTCTTCAAGTAATCTCAGAGGACCAATTCCTTCAAGAGTTACTACGTTGACCAACTTAGAAATACTGAACCTGAGTCACAATAGCTTCAATGGCAGTGTCCCTCCATTTCCACCTTCCTCTTCGCTGATATCAGTAGATCTGAGCTATAATGATCTCACGGGATCGCTTCCGGGGTCATTTACATCACTGCCGCATCTAAAATCCTTATATTTTGGCTGCAATCGTGATATGAGCAATGAAGTTCCATCAAACTTGACCAGTTCACTGAATACAGATTATGGAAGATGCAATTCTAAAGGATCAAGAATTTCAGCACAAGTCATCATTGGAACAGTTACATGTGGGTCGGCCTTGCTTACTCTGGCTGTCGGATTTTTTCTTGTCTGCCGTTATAAGAAAATATTAATTCCCTGGGGAGGATTTGGTGGAAAGAGATACCCTAACTCAATGGCGACAAATATAATTTTCTCTTTGCCCAGCAAAGACGATTTCTTCATGAAGTCAGTATCTATTCAAAATTTTACCCTGGATTATATAGAGGCAGCCACCGAGAAGTACAAAACCTTAATAGGTGAAGGAGGTTTTGGCTCTGTTTACAGGGGCATTCTAGACGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAAGGAACTCGAGAATTTGACAATGAGCTCAATCTGCTTTCTGAAATACGGCATGAAAACCTGGTTCCTCTTCTTGGTTACTGTATTGAAAATGATCAACAGATTCTTGTATACCCCTTTATGTCCAACGGCTCTTTACAGGATAGACTATACGGAGAACCAGCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTCTCTATTGCACTTGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTTGCGGGGCGTTCCATAATACATAGGGATGTAAAATCAAGCAATATACTTCTGGATCATAGCATGACGTCTAAGGTAGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGAAGGGGACATTAGTGCTTCTCTTGAACTGAGAGGAACAGCAGGATATCTGGATCCCGAGTACTACAGTACCCAGCAGTTATCTGCCAAAAGTGACGTCTTTAGCTTTGGCGTGCTTCTACTTGAAATTGTGAGTGGTCGGGAACCTCTCGACATACACAGACCACGAAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGGGAGGCAAAGATTGATAAAATTGTGGATCCTGGCCTCAAAGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTCTCATGTGTTGAACCCTTCTCAAGATTTCGACCTGAGATGGATGTTGTTGTCCGTGAGTTGGAAGATGCTCTAATTATAGAAAACAATGCATCTGAATACATGAAGTCAATAGAGAGCCTTGGAGGGTCCAATCGCTACTCCATCGTAATAGAGAAAAGGGTGCTACCGCCCACTCCATCTACGACACAATCAACAATCACAACCCGAAACTTGTCCTTCCCACAGCCGAGATAG 2886 0.4265 MAKTIMMEKLDIWLFRLALVYVFCLLVFIRSSSASEGFVSIACCADSRYTDPETNLSYISDYAWFPDRTSCRSLTKQKANHTGDERARVFDVIDKGKRCYSLPTIKGEVYLLRGTFPFDWSLPDLSFDVSIAVTSLGSVRPFQDFEIIEGIFRASRNYIDFCLVKEEEDGNPYISELELRPVHEEYLQGLPSSVVKLISRNKLGGTKNDIRYPTDPNDRIWKETSSSSSASSISSFNVSISGQIASVTPPLQVLQTALTHPERLEFIHISPETWNDEYRLFLYFLELNDTVRSGQRVFDIYLNGEIKERSFEILAGGSNYRHTVLNVSSNGPINLTLVKASRSEYGPLCNAYEILEVLPWMKETNESDCKRISKCCYLLPQTLCFSLTSTIFLPSVKEMSKVAEELMVQNRGNKALESWSGDPCMPFSWKGVECDRLDGSTVINKLDVSSSNLRGPIPSRVTTLTNLEILNLSHNSFNGSVPPFPPSSSLISVDLSYNDLTGSLPGSFTSLPHLKSLYFGCNRDMSNEVPSNLTSSLNTDYGRCNSKGSRISAQVIIGTVTCGSALLTLAVGFFLVCRYKKILIPWGGFGGKRYPNSMATNIIFSLPSKDDFFMKSVSIQNFTLDYIEAATEKYKTLIGEGGFGSVYRGILDDGQEVAVKVRSATSTQGTREFDNELNLLSEIRHENLVPLLGYCIENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGLAYLHTFAGRSIIHRDVKSSNILLDHSMTSKVADFGFSKYAPQEGDISASLELRGTAGYLDPEYYSTQQLSAKSDVFSFGVLLLEIVSGREPLDIHRPRNEWSLVEWAKPYIREAKIDKIVDPGLKGGYHAEAMWRVVEVALSCVEPFSRFRPEMDVVVRELEDALIIENNASEYMKSIESLGGSNRYSIVIEKRVLPPTPSTTQSTITTRNLSFPQPR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1023 961 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 708 917 - -
Dere13g1023 961 Gene3D Ribonuclease Inhibitor 399 553 IPR032675 -
Dere13g1023 961 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Dere13g1023 961 SUPERFAMILY L domain-like 416 533 - -
Dere13g1023 961 SUPERFAMILY Protein kinase-like (PK-like) 612 904 IPR011009 -
Dere13g1023 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Dere13g1023 961 MobiDBLite consensus disorder prediction 942 961 - -
Dere13g1023 961 ProSiteProfiles Protein kinase domain profile. 632 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1023 961 Pfam Protein tyrosine and serine/threonine kinase 635 904 IPR001245 GO:0004672|GO:0006468
Dere13g1023 961 Pfam Malectin-like domain 46 356 IPR024788 -
Dere13g1023 961 Gene3D - 198 357 - -
Dere13g1023 961 Gene3D Phosphorylase Kinase; domain 1 603 707 - -
Dere13g1023 961 PANTHER OS07G0107800 PROTEIN-RELATED 39 908 - -
Dere13g1023 961 SMART serkin_6 632 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1023 961 Gene3D Transferase(Phosphotransferase) domain 1 708 924 - -
Dere13g1023 961 FunFam Nodulation receptor kinase 598 707 - -
Dere13g1023 961 CDD STKc_IRAK 638 905 - -
Dere13g1023 961 Pfam Leucine rich repeat N-terminal domain 413 435 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1023 Dere-ChrDere13 13380561 13389658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1023 17 911 Receptor kinase-like Gene Family AT1G67720 33.081 1.18e-124 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere13g1023 Malectin_like 8.1e-48 CL0202