Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere13g1006 | ATGGCGTCCGACACCTTCACCGACAAGAACGCCATTTTCAGAAAACTGAAGGCCAAGTCTGATAATAAGATGTGTTTTGATTGTAATGCAAAGAATCCAACTTGGGCGTCCGTCACTTATGGAATCTTTCTCTGCATCGATTGCTCGGCTGTTCATCGCAGCCTTGGGGTGCACATCAGCTTTGTCAGATCTACAAATTTGGATTCATGGACTCCTGAGCAACTGAGAATGATGAGCTTTGGAGGAAACAATCGTGCACAGGTTTTCTTTAAGCAACATGGTTGGACTGATGGTGGTAAAATAGAGGCCAAATATACATCTAGAGCTGCAGATTTGTATAGACAACTTCTTTCAAAGGAAGTAGCCAAAAGTATGGCAGAGGAGGCCGGTTTGCCATCGTCACCTGGTGCTTCTCAGTCTTCACAAGGGCTTAATGGACTTCCTGATGTTAGAACCAAAGAAGTACTAAATGAGAACACTCAGGGGAAGCCAGAAATGCCTGAAAGCAGTGCTTCACCTAGAGCTTCACCTAAAGCTTCACATACAATTGTTTCTAGTACCATAAAGAAGCCTATTGGCACAAAAAAGAATGCCAAGAGTGGGGGCCTTGGTGCCCGGAAGCTTACTAGAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCAGAAGAACCGCCTGCTCCAGTTTCTTCCTCGACAAACAGCAGTTTGCCTGCTGGGCCATCCCTGACATCACGATTTGAGTATGTAGACGACATCCAGTCTTCTGACTCGAATGCTGGTGGTGCACATGTGATTAATCATGTGTCACCTCCAAAGTCATCAAGCTTCTTTGCTGATTTTGGAATGGAAAGTGGTTTTCCGAAAAAATATGGGTCAATTTCGTCGAAAGTGCAAATTGAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATTTCTTCAGCCCAATTTTTTGGAGATCAGAACAAAGCTGCAAATGTGGATGCTCAAGTTACTTTGTCCAAATTTTCGGGTTCAACTGCTATCTCCAGTGCTGATCTTTTTGGTAACTCAGCAGATAACTCCTCCATTGATGTCACTGCCAACGACCTTCTCAATCGTCTGACATTCCAGGCTCAGCAGGATATATCTTCCCTTAAAAATATCGCTGGAGAGACTGGAAAGAAGCTCAGCTCCCTGGCCTCCAGTTTGATGACGGATCTTCAGGACAGAATTCTTTAA | 1230 | 0.4415 | MASDTFTDKNAIFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLRMMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQLLSKEVAKSMAEEAGLPSSPGASQSSQGLNGLPDVRTKEVLNENTQGKPEMPESSASPRASPKASHTIVSSTIKKPIGTKKNAKSGGLGARKLTRKPSESLYEQKPEEPPAPVSSSTNSSLPAGPSLTSRFEYVDDIQSSDSNAGGAHVINHVSPPKSSSFFADFGMESGFPKKYGSISSKVQIEESDEARKKFSNAKSISSAQFFGDQNKAANVDAQVTLSKFSGSTAISSADLFGNSADNSSIDVTANDLLNRLTFQAQQDISSLKNIAGETGKKLSSLASSLMTDLQDRIL | 409 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere13g1006 | 409 | PRINTS | HIV Rev interacting protein signature | 41 | 58 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | PRINTS | HIV Rev interacting protein signature | 62 | 83 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | PRINTS | HIV Rev interacting protein signature | 22 | 41 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | Gene3D | Arf GTPase activating protein | 1 | 134 | IPR038508 | - | |
Dere13g1006 | 409 | MobiDBLite | consensus disorder prediction | 133 | 147 | - | - | |
Dere13g1006 | 409 | MobiDBLite | consensus disorder prediction | 225 | 244 | - | - | |
Dere13g1006 | 409 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 11 | 124 | IPR037278 | - | |
Dere13g1006 | 409 | MobiDBLite | consensus disorder prediction | 154 | 193 | - | - | |
Dere13g1006 | 409 | CDD | ArfGap_ArfGap2_3_like | 8 | 123 | - | - | |
Dere13g1006 | 409 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 10 | 128 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | Pfam | Putative GTPase activating protein for Arf | 12 | 108 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD10 | 1 | 137 | - | - | |
Dere13g1006 | 409 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED | 5 | 409 | - | - | |
Dere13g1006 | 409 | SMART | arf_gap_3 | 10 | 126 | IPR001164 | GO:0005096 | |
Dere13g1006 | 409 | MobiDBLite | consensus disorder prediction | 127 | 244 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere13g1006 | Dere-ChrDere13 | 13033140 | 13037074 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere13g1006 | 13 | 91 | C2H2 Transcription Factor Family | AT4G21160 | 46.250 | 7.26e-20 | 88.2 |