Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0988 ATGGGCAGGCCACCGTGTTGTGAGGAAAGTGGTGTGAAGAGAGGACCATGGACACCTGAAGAAGATGAGAAGCTTATTCAATATATCAGCAAACATGGGAGTGGAAATTGGAGAACAGTCCCAAAGCAAGCAGGCCTCAACAGGTGGTCAAAGATTGCAACTCATCTTCCAAGACGAACTGATAATGAGATAAAGAACTTCTGGAACACCCATATAAGGAAGAAGCTTCTCCGGATGGGAATTGACCCAGAAACCCACAAGCCAAGAACTGACTTGAAACAACTCGTGAATCTCTCGCAGTTGCTTGGCATGTCTAATAATAACGTTATGAGCTCTTGGGGCCATTCAATTCTTGGTTTACAGCAACCAGATGTGACACAGTTAGGCAAAATCCAATTATTACAAAATCTGTTGCAGCTTATAAATGGAAATTCTTCATTTGTTAATTATACGGAGAGTGCTCCATCTCTCTTAGGATGTCAGGGCCTCATCAATAACCCATTGGAAGCATATGCAAATGGGACAAACAGTACGCAAGAATTGTATGCAAGCCCTGCTTTATTCCCTCCAGCACCAAGTGATTCCCGGAAGGATATTTCAAAATCATGGACAGACATGGAAGGAGGTCTTAATCCAGAAGTCGTTGGATTTAACAACATAAGCGCTTCAACACAAAAAAGTGAACCAGAAGATTCCCCACTACTTCCTGCGTTAGTTGCTATCTCTGCAGGGAATAATAACTTCAACCAATTAGAGAGTAGCTGTAATAAGGGTCAAATATCTACTCGGTCACCTTCTTCCTCAGTCTTTGATGCTTGGGAGAAGTTCTTGTTGGAAGATGACACAAGCGATTCCTACTGGAAATAA 867 0.4245 MGRPPCCEESGVKRGPWTPEEDEKLIQYISKHGSGNWRTVPKQAGLNRWSKIATHLPRRTDNEIKNFWNTHIRKKLLRMGIDPETHKPRTDLKQLVNLSQLLGMSNNNVMSSWGHSILGLQQPDVTQLGKIQLLQNLLQLINGNSSFVNYTESAPSLLGCQGLINNPLEAYANGTNSTQELYASPALFPPAPSDSRKDISKSWTDMEGGLNPEVVGFNNISASTQKSEPEDSPLLPALVAISAGNNNFNQLESSCNKGQISTRSPSSSVFDAWEKFLLEDDTSDSYWK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0988 288 CDD SANT 16 72 IPR001005 -
Dere13g0988 288 ProSiteProfiles Myb-like domain profile. 9 72 IPR001005 -
Dere13g0988 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 76 IPR017930 -
Dere13g0988 288 PANTHER F14D16.11-RELATED 1 48 - -
Dere13g0988 288 Pfam Myb-like DNA-binding domain 14 71 IPR001005 -
Dere13g0988 288 SMART sant 13 74 IPR001005 -
Dere13g0988 288 Gene3D - 12 78 - -
Dere13g0988 288 SUPERFAMILY Homeodomain-like 3 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0988 Dere-ChrDere13 12748810 12749896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0988 1 288 MYB Transcription Factor Family AT4G17785 34.831 5.26e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere13g0988 Myb_DNA-binding 6.8e-16 CL0123