Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0986 ATGTTGAATCTGGTCAACTTGAAGACAAAAGGAAAAGCAGCTCTGTACAGGTTTTGCATTATGGGTAGGCCACCGTGTTGTGAGGAGAGTACTGGTGTGAAGAGAGGGCCATGGACACCTGAAGATGATGAGAAGCTTGTTCATTATATCAGCAAACATGGGAGTGGAAATTGGAGAACAGTCCCAAAGCAAGCAGGCCTCAACAGGTGGTCAAAGATTGCTACTCATCTTCCAGGGCGAACTGACAATGAGATAAAGAACTTCTGGAACACCCAATTAAGAAAGAAGCTTCTCCAGATGGGTATTGACCCAGAAACCCACAAGCCAAGGACTGACTTGAAACACATCATGAATCTCTCGCAGTTGCTTGGCATGTCTAATAATAACGTTTTCAGCTCTTGGGGCCATTCTGCTCTTGGTTTACAGCAACCTGATGCAACTCAGTTAGCCCAAATCCAACTATTGCAGATTCTGTTGCTGCTTAGAAATGGCAATTCATCATTTGTCAATAATAATATGCAGAGTACTCCCTCTCTCTGGGGATATCAGAGCTTGATGAATAACCAATTGGAACAATATGTAAATGGGACAAACACTACCTTCCTCAACAACAAAGAGCCTTTCTTGCGGGACCAAGAATTATATGCAGGCGCTGCTCTATTTCCTCAAGCTCCAAGGGAATCACTTCATGATATTTCAGAATCATGGCCTGACGCTGACCTCGAAGGGGCATCAAATCAAGAAGTTTTTGGTATCAATAAGGGTACTACTACTAGAAGTAATTCATCACATGATATAAATCGAGCAGAAAACCCACTTCCTGCAGTAGTTTCAGCCAGCTTCAACGAAGTGGAGAGTAGCTTTAGATCTAATATGGATGAGATGCCCACCCAGTCACCTTCATCAACAATCGTTGAGGCTTGGGAGAAGCTTTTGGAAGATGATACTAGCGATTCCTACTGGAAAGAACTTCTAGACTTGACATCCACTTCCGCATCGCCGATTTCGTTTTAA 1014 0.4329 MLNLVNLKTKGKAALYRFCIMGRPPCCEESTGVKRGPWTPEDDEKLVHYISKHGSGNWRTVPKQAGLNRWSKIATHLPGRTDNEIKNFWNTQLRKKLLQMGIDPETHKPRTDLKHIMNLSQLLGMSNNNVFSSWGHSALGLQQPDATQLAQIQLLQILLLLRNGNSSFVNNNMQSTPSLWGYQSLMNNQLEQYVNGTNTTFLNNKEPFLRDQELYAGAALFPQAPRESLHDISESWPDADLEGASNQEVFGINKGTTTRSNSSHDINRAENPLPAVVSASFNEVESSFRSNMDEMPTQSPSSTIVEAWEKLLEDDTSDSYWKELLDLTSTSASPISF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0986 337 CDD SANT 37 91 IPR001005 -
Dere13g0986 337 PANTHER F14D16.11-RELATED 68 314 - -
Dere13g0986 337 SMART sant 34 95 IPR001005 -
Dere13g0986 337 ProSiteProfiles Myb-like domain profile. 30 93 IPR001005 -
Dere13g0986 337 Gene3D - 29 66 - -
Dere13g0986 337 Gene3D - 67 98 - -
Dere13g0986 337 Pfam Myb-like DNA-binding domain 35 92 IPR001005 -
Dere13g0986 337 SUPERFAMILY Homeodomain-like 32 89 IPR009057 -
Dere13g0986 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 97 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0986 Dere-ChrDere13 12709602 12712573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0986 21 326 MYB Transcription Factor Family AT4G17785 33.884 7.39e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere13g0986 Myb_DNA-binding 4.2e-15 CL0123