Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0983 ATGGATGCAGATGAGAGAAAGAAGGAAGGAGAGGGGAAAAAGCAGAAAAAAGTTCCCTTCTTAAAGCTCTTCTCCTTCGCTGACTTTTATGATTATGTCCTAATGGCTGTTGGATCTGTTGGAGCATGCGTTCATGGTGCTTCTGTACCTGTTTTCTTCATCTTTTTCGGAAAGTTGATTAACATAATAGGCTTGGCTTATCTTTTCCCCAAAGAAGCTTCTCACAAAGTTGCTCAGTATTCGTTGGATTTCGTGTATCTGAGTATAGCAATATTATTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCACACTGGAGAACGACAAGCAGCGAAGATGAGAGTGGCTTATTTAAGGTCAATGTTGAATCAAGATATAAGTCTGTTTGATACAGAGGCATCAACAGGAGAGGTCATTTCTGCCATTACCAGTGACATTATTGTTGTTCAGGATGCACTATCTGAGAAGGTAGGAAATTTCATGCACTACATTAGCCGGTTTATAGCGGGTTTTATTATTGGGTTTGTGAGAGTGTGGCAGATTAGTTTAGTGACACTTTCAATTGTGCCCTTGATCGCCCTTGCGGGAGGTCTCTATGCGTACGTGACGATTGGGCTTATTGCGAAAGTTCGAAAGGCCTACGTGAGAGCTGGTGAAATCGCTCAAGAAGTGATAGGCAATGTTAGAACAGTACAGGCATTTGCAGGAGAAGAAAGAGCAGTTAGATCATACAAAGAGGCTCTGATGGGCACTTACAAAAATGGTCGAAAAGCAGGATTAGCAAAGGGTTTAGGACTAGGCTCCATGCATTGTGTTCTTTTTCTGTCATGGTCCCTGCTTGTTTGGTTCACTAGCATTGTTGTTCACAAGAATATCGCCAATGGTGGAGAGTCTTTCACTACCATGCTCAACGTTGTTATCGCGGGCCTGTCCCTTGGGCAGGCAGCACCAGATATCACTGCATTTGTCCGAGCAAAGGCAGCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACAATGAGCAAAATCAGCTCAAAAACTGGTTACAAATTAAGCAAATTAGAAGGTCACATCCAATTCAAAGGTGTTTGCTTCAGCTACCCATCTCGCCCAGATGTAGTTATCTTCAACAACCTTAATATTGACATTCCTTCGGGGAAAGTTGTTGCCCTTGTTGGGGGAAGTGGTTCTGGAAAAAGCACCATTATATCTCTAATTGAGCGCTTCTACGAACCCCTTTCTGGACAGATCCTATTAGATGGGAATAACATCAGGGAACTTGATCTCAAATGGCTAAGGCAGCAGATAGGGTTGGTTAATCAAGAACCTGCCCTTTTTGCTACAAGCATCAGGGAGAACATACTGTATGGAAAAGATGATGCCACTCTTGAAGAACTTAAACAAGCTGTGAAGCTTTCCGATGCTCAGTCTTTCATTAACAATCTTCCTGACAGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAGCTATCAGGTGGACAAAAGCAGAGGATTGCATTATCTCGTGCTTTAGTGAAGAATCCATCAATCCTTTTATTGGATGAAGCAACCAGTGCTCTGGACGCAGAGTCTGAGAAGAGTGTACAGGAGGCTCTTGACCGTGTCATGGTTGGTAGAACAACTGTCGTAGCAGCACACAGACTTTCTACAATCAGGAATGCGGATGTGATTGCTGTTGTTCAAGGAGGGAGGATTGTGGAAACTGGCAGCCATGAGGAGCTCATAGCCGACCCAAACAGTGCATATGCATCTCTTGTTAAGCTCCAGGAGGCAGCTTCTTTACAAAGACAACCTTCGGAGGGTCCTAGCTTGGGACGGCCATCAAGCATAGAGTACTCAAGAGAACTATCCCGTACAACGACGAGCCTTGGTGGTAGTTTTCGATCAGATAAAGAATCCACTGGCCGTGTTGGTGCTGATGAATTGGATAATGTTGGCAATTCAAAGCATATTTCTGCAAGAAGATTATATTCCATGGTTGGACCTGATTGGTATTACGGGGTTTTTGGGACCTTCTGTGCATTTATTGCTGGAGCCCAGATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTGTCATATTACATGGACTGGGATACAACCCGTCACGAGGTCAAAAAAATTGCTTTTCTCTTTTGCGGGGCTGCAGTTGTGACTGTTGTTGTCCATGCCATTGAACACCTTTGTTTTGGAATCATGGGCGAGCGACTTACTCTTCGTGTCCGAGAAAGGATGTTTTCTGCTCTTTTAAAGAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCGTCGCGTTTAGAGACTGATGCAACTTTGTTACGAACTATAGTTGTTGATCGGTCTACAATTCTCTTGCAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATCGCTTTCCTCTTGAACTGGAGGATAACACTTATTGTCTTGGCCACATATCCTTTGATCATTTGTGGTCACATTAGTGAGAAACTCTTCTTTCAAGGATATGGTGGCAACTTGAGCAAAGCATATCTAAAGGCCAACATGCTTGCAGGGGAGGCTGTGAGTAATATACGCACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTTGAACTTTATGCAAATGAGCTAGTTGATCCTTCCAAGCGTTCATTTAAACGGGGCCAAATTGCAGGCATTTTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTACGGCCTTGCATTGTGGTATGGTTCTGTATTGATGGAAAAGGAGCTTGCCAGCTTTAAGTCAATCATGAAGTCATTTATGGTTTTAATAGTAACAGCACTGGCTATGGGGGAGACTTTGGCTCTGGCTCCTGACCTTTTGAAGGGGAACCAAATGGTTGCATCGGTTTTTGATGTGATGGATAGAAAGTCGGGAGTCATAGGTGATACTGGAGAAGACCTAAAGACAGTGGAGGGAACCATTGAGCTCAAAAGTATCCATTTCAGCTACCCTTCAAGGCCAGATGTGGTCATTTTTAAGGATTTCAATCTCAAAGTGCCTTCAGGCAATAGTCTTGCCTTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTTATCTCTCTTATACTCAGGTTTTACGATCCAACTTCGGGGAAGGTGATGATTGACGGAAAAGACATCAGGAGTGTTAATCTGAAATCGCTCAGGAAACACATTGGTCTTGTGCAACAAGAGCCAGCTCTGTTTGCAACATCAATATATGAAAATATTCTATATGGAAAAGAAGGAGCCTCTGAATCAGAGGTGATTGAAGCAGCCAAGCTTGCTAACGCTCACAGCTTTATAAGTGCTCTTCCTGAGGGCTACTCCACCAAAGTGGGTGAGCGAGGAGTTCAACTATCTGGTGGCCAAAGACAAAGGGTAGCCATTGCTAGAGCCGTTTTGAAGAACCCAGAAATTTTGCTACTCGATGAAGCCACTAGCGCTCTGGATGTGGAATCAGAGCGTATAGTTCAGCAAGCTCTGGACAGATTGATGAAGAATAGAACAACTGTGATTGTGGCACATAGGCTATCCACAATAAGAAATGCAGATCAAATCTCAGTTTTGCAGGATGGGAAGATAGTAGAGCAAGGTTTACATTCAAGTCTCGTAGAAAACAAAAATGGAGCATACTTTAAATTAGTCAACCTTCAACAGCAACAGAATCAACAATAG 3720 0.4315 MDADERKKEGEGKKQKKVPFLKLFSFADFYDYVLMAVGSVGACVHGASVPVFFIFFGKLINIIGLAYLFPKEASHKVAQYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRVAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFIAGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAQEVIGNVRTVQAFAGEERAVRSYKEALMGTYKNGRKAGLAKGLGLGSMHCVLFLSWSLLVWFTSIVVHKNIANGGESFTTMLNVVIAGLSLGQAAPDITAFVRAKAAAYPIFEMIERDTMSKISSKTGYKLSKLEGHIQFKGVCFSYPSRPDVVIFNNLNIDIPSGKVVALVGGSGSGKSTIISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEELKQAVKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIALSRALVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVAAHRLSTIRNADVIAVVQGGRIVETGSHEELIADPNSAYASLVKLQEAASLQRQPSEGPSLGRPSSIEYSRELSRTTTSLGGSFRSDKESTGRVGADELDNVGNSKHISARRLYSMVGPDWYYGVFGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIAFLFCGAAVVTVVVHAIEHLCFGIMGERLTLRVRERMFSALLKNEIGWFDDTNNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFLLNWRITLIVLATYPLIICGHISEKLFFQGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLELYANELVDPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFDVMDRKSGVIGDTGEDLKTVEGTIELKSIHFSYPSRPDVVIFKDFNLKVPSGNSLALVGQSGSGKSSVISLILRFYDPTSGKVMIDGKDIRSVNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASESEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMKNRTTVIVAHRLSTIRNADQISVLQDGKIVEQGLHSSLVENKNGAYFKLVNLQQQQNQQ 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0983 1239 CDD ABC_MTABC3_MDL1_MDL2 995 1232 - -
Dere13g0983 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 597 IPR027417 -
Dere13g0983 1239 CDD ABC_6TM_Pgp_ABCB1_D1_like 35 332 - -
Dere13g0983 1239 FunFam ABC transporter B family member 4 985 1238 - -
Dere13g0983 1239 Pfam ABC transporter transmembrane region 40 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere13g0983 1239 Pfam ABC transporter transmembrane region 677 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere13g0983 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 676 962 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere13g0983 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1231 IPR003439 GO:0005524
Dere13g0983 1239 ProSitePatterns ABC transporters family signature. 1134 1148 IPR017871 GO:0005524|GO:0016887
Dere13g0983 1239 CDD ABC_MTABC3_MDL1_MDL2 359 597 - -
Dere13g0983 1239 FunFam ABC transporter B family member 4 349 605 - -
Dere13g0983 1239 Gene3D ABC transporter type 1, transmembrane domain 83 971 IPR036640 GO:0005524|GO:0016020
Dere13g0983 1239 CDD ABC_6TM_Pgp_ABCB1_D2_like 665 978 - -
Dere13g0983 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 595 IPR003439 GO:0005524
Dere13g0983 1239 MobiDBLite consensus disorder prediction 626 648 - -
Dere13g0983 1239 SUPERFAMILY ABC transporter transmembrane region 662 976 IPR036640 GO:0005524|GO:0016020
Dere13g0983 1239 ProSitePatterns ABC transporters family signature. 498 512 IPR017871 GO:0005524|GO:0016887
Dere13g0983 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 36 324 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere13g0983 1239 SMART AAA_5 386 572 IPR003593 GO:0016887
Dere13g0983 1239 SMART AAA_5 1022 1194 IPR003593 GO:0016887
Dere13g0983 1239 Pfam ABC transporter 1014 1162 IPR003439 GO:0005524
Dere13g0983 1239 FunFam ABC transporter B family member 2 796 992 - -
Dere13g0983 1239 PANTHER ABC TRANSPORTER B FAMILY 4 600 IPR039421 -
Dere13g0983 1239 FunFam ABC transporter B family member 1 22 358 - -
Dere13g0983 1239 SUPERFAMILY ABC transporter transmembrane region 23 329 IPR036640 GO:0005524|GO:0016020
Dere13g0983 1239 Gene3D - 985 1239 IPR027417 -
Dere13g0983 1239 Pfam ABC transporter 378 526 IPR003439 GO:0005524
Dere13g0983 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 988 1233 IPR027417 -
Dere13g0983 1239 Gene3D - 357 610 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0983 Dere-ChrDere13 12670992 12678604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0983 8 1239 Calmodulin-binding Proteins AT2G36910 49.366 0.0 1212