Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0981 ATGGACGGAGTAAATAACGGCGGCACGCAAACGCCGGCTCCGGGCCCGGCGTCGGTGCCGGCGCCCATTCCTAATGCCAACGCGCCTCCGCCGTTTCTTAGTAAGACTTACGACATGGTGGATGACCCGTCCAGCGATGCGATCGTGTCTTGGAGCTCAACCAACAATAGCTTTGTGGTTTGGAACCCACCCGAGTTTGCCAGGGACCTTTTACCTAAGTACTTCAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAATACATATGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGGCGAAAACCTGCCCATGGTCACAGCCATCAGCAGGCACAACAATCACATGGACAGAGTTCATCTGTAGGGGCATGTGTAGAGGTTGGGAAGTTTGGTCTTGAGGAAGAGGTTGAGATCCTCAAAAGGGATAAGAATGTGCTCATGCAGGAGCTTGTGAAGTTGAGACAGCAGCAACAGGCCACTGAGAACCAGATGCAACAAATACTTCAGCGCCTTCAGGGAATGGAACAACGTCAGCAACAAATGATGTCATTCCTTGCAAGGGCTGTCCAGAGCCCTGGCTTCTTGGCTCAGTTTGTACAACAGCAAAATGAGAGCAATAGACGCATAAATGAAGCCAACAAAAAACGGCGGCTTAAGCAAGAAGGTATTGCTGAAATGGAGGGTGCTGCTGCCTCTGATGGACAAATTGTTAAGTATCAACCTCTGATGAATGAAGCAGCAAAAGTGATGCTAATGCAGATGATGAAATTGGATACTTCTCGGCTGGAATCTTATAATAATAACTCTGATAATTACTTGATTAGTGATGGCCCAACATTGTCCAGTGCAATGGACAGTGGCAGCTCCTTGAACCGGAGTTCTGGAATAACCCTTCAAGAGGTCCCCCCAACTTCAGTGAATGCCCCCTTAGCTGGCAAATCTGAAAAGCAATCTACTCCACAGTCTGCAGCTGCTGAAAAAGTTACAACAGCCGAGTACCCAGATGTAAATGTGATGGTTGTTGCATCTGATGCACCCTCTATCCCTGTTTCTGAGGTTGATGTCATCATGCCTGAGCTTTCTCCATTACCAGAGATAGCGACAGGAGGTATTCTTGACATTCCTCAAGCGAATTATATGGGACCTGAGACAGGAAACGAGGGATATATTGATCCTACCTCATTGGGAGTAAATGGGTCATTGCCCATTGATATTGGTAGTATATCACCTGATACAGACATTGATGACTTGTTGCGCAATTCTTCCTTTTGGGATGACTTAGTGCAAAGTCCACTACCAGAGGATATTGAGACTGAAGCTGCTGAAGTGTCTAAAGGGAATGAGGTGGAGCCAATGGAAAATGCATGGGACAAAGCTGAACATATGGATCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGACGCAAAAAGAGTCTTCCGTCCTAAACTCTTGTTTGCCTTGCTTTGTGAAGCCTCTTTATTCATGTTTTACTTCTTTCTAAAATCATCATCGGAGTCAGAATTCCGAGTACTCGAGAGGATCAGCGCTGTCGGGGGTTTTTATGACCTTGTCTTTCCTGAAGTGGTAATGACAAAATCAGATATCTTAGATTCTTTCCTTACCGAAGGATCTTTTGCGGAAAAACAAGAAGGAATGGGAAAAGACGTCAGTCAAAATAGCTCAAGGTTTGAGGATTCCTATTGTTCGGTTGATTTACTTGAAGGACGAGGAGTGCAGAAACAATTGACGTCAATGGTTACCTCGTTAAGCCCCTGTACCGTTGTTTTCTTGATCTTTCATCATATGTTAGGATATGCCATTTGA 1890 0.455 MDGVNNGGTQTPAPGPASVPAPIPNANAPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQAQQSHGQSSSVGACVEVGKFGLEEEVEILKRDKNVLMQELVKLRQQQQATENQMQQILQRLQGMEQRQQQMMSFLARAVQSPGFLAQFVQQQNESNRRINEANKKRRLKQEGIAEMEGAAASDGQIVKYQPLMNEAAKVMLMQMMKLDTSRLESYNNNSDNYLISDGPTLSSAMDSGSSLNRSSGITLQEVPPTSVNAPLAGKSEKQSTPQSAAAEKVTTAEYPDVNVMVVASDAPSIPVSEVDVIMPELSPLPEIATGGILDIPQANYMGPETGNEGYIDPTSLGVNGSLPIDIGSISPDTDIDDLLRNSSFWDDLVQSPLPEDIETEAAEVSKGNEVEPMENAWDKAEHMDQLTEQMGLLSSDAKRVFRPKLLFALLCEASLFMFYFFLKSSSESEFRVLERISAVGGFYDLVFPEVVMTKSDILDSFLTEGSFAEKQEGMGKDVSQNSSRFEDSYCSVDLLEGRGVQKQLTSMVTSLSPCTVVFLIFHHMLGYAI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0981 629 Coils Coil 627 629 - -
Dere13g0981 629 Pfam HSF-type DNA-binding 32 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 MobiDBLite consensus disorder prediction 1 27 - -
Dere13g0981 629 Coils Coil 150 198 - -
Dere13g0981 629 MobiDBLite consensus disorder prediction 304 347 - -
Dere13g0981 629 ProSitePatterns HSF-type DNA-binding domain signature. 71 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 FunFam Heat shock transcription factor 1 25 122 - -
Dere13g0981 629 Gene3D - 25 122 IPR036388 -
Dere13g0981 629 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 PRINTS Heat shock factor (HSF) domain signature 32 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 SMART hsfneu3 28 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere13g0981 629 Coils Coil 216 236 - -
Dere13g0981 629 MobiDBLite consensus disorder prediction 304 349 - -
Dere13g0981 629 MobiDBLite consensus disorder prediction 120 141 - -
Dere13g0981 629 SUPERFAMILY "Winged helix" DNA-binding domain 27 121 IPR036390 -
Dere13g0981 629 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 318 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0981 Dere-ChrDere13 12637380 12642410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0981 7 502 HSF AT1G32330 52.964 1.43e-165 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere13g0981 HSF_DNA-bind 5.8e-33 CL0123