Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere13g0972 | ATGCCACGTGTATCTCCCGCTCAAAACTGTACGCCACGTGTCGACTCCAACTTGTTCCTTGGAATTACCTTGGGTCACGCATCGTGAGAGAATGGACGATTGGATTTCAACCTTGTGTGGACAATCAAACACCGTTTTGGTACACGTGATAATTCCATCTTTCCTGCTACTGACTTTTCTCTGACCGAAGGCGTTGGATCTCTCTGTGGCCTGATTTCAGCCTTGTGCTCGGCGTTCTACGAGAATGTGGCGAGTCTGGTTGTTGCTAAAGGCTCGCTTTTAATCTGTAAAATCCAGGATCGTGATCTAGGGTTTGGCTCTGGGATTTGGATTCGGTTTTGTGATTTCTTGACCAAGAGAGCGAAGACGGAGGCCTACAGGGAGCGACCTCGGAATGAAATGGTGGAAGGAAGGGTTTGTCTGCCCAGGGGAGCTAGAAATGTGTTAGAATCTTTGAAGCATAAAAGGCTTCAGCGGGCAAAATCTGTTACTGCCACCGAAACCAGTGTCGCTAATATGATGACCAGAAGTGGAGGAGATGCTTTAAGAGCTTCGTCATCATGTGGTGTGAGATTGCATGGTTATGCAGATGCCTTTTCCAAGCGGAAGGTGGATAAGTTTGACATGGGTGATCTTGAATGGACTGAAAAAATTCCAGAGTGTCCTGTATATTCCCCAACAAAAGAGGAATTTGAGGACCCTTTGGTTTATTTGCAAAAAATAACTCCCGAGGCTTCAAAATATGGTATATGCAAGATTATTTCTCCTTTAAGTGCTTCTGTTCCCGCTGGAGTTGTTTTGATGAAGGAGAAAGCCGGATTTAAGTTTGCGACCAGAGTACAGCCACTTCGCCTTGCTGAGTGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTTCGCGATTTTGAAAAAATGGCGAACAAGGTTTTTGCACGTAGATACTGCAGTGCGGGATGTCTTCCTGCCACATATATGGAAAAAGAGTTTTGGAACGAAATTAGCTACGGAAATATGGTATCTGTCGAATATGCATGTGATGTTGATGGTAGTGCTTTTTCCTTGTCTCCCACCGATCAGCTTGGCAGCAGCAAATGGAATTTGAAGAAGCTTTCACGGTTGCCTAAGTCCATTTTGCGCCTCTTGGAAACAGTAATTCCGGGAGTAACCGAACCCATGCTATACATAGGTATGCTGTTTAGTATGTTCGCTTGGCATGTGGAGGATCACTATTTGTACAGTATTAATTATCATCACTGTGGGGCATCAAAAACTTGGTACGGCATTCCAGGTCATGCAGCTTCAGAATTTGAAAGGGTGGTGAGAGAACATGTGTATACTAATGATATTCTCTCAAGTGAAGGGGAAGTTGGAGCCTTTGATGTTCTCCTGGGGAAAACAACGCTGTTTCCTCCAAATATTTTGTTGGAACATGAAGTCCCTGTCTACAAAGCTGTTCAACAGCCGGGGGAGTTTATAGTTACCTTCCCTAGAGCATATCATGCTGGTTTTAGTCATGGTTTTAACTGTGGAGAAGCTGTAAATTTTGCTATTGGTGATTGGTTTCCTTTAGGGGCCATTGCTAGCAGGCGATATGCCCATCTTAACAGGGTTCCTCTGCTACCTCATGAAGAACTTTTATGCAAAGAAGCAATGCTCCTCTATACAACCTTAGAACTTGAAGATTCAGACTTTCCTTCTGCAGACTTGATGTCTCATAGTAGCATCAAGATCTCTTTCGTTAATCTGATACGATTCCAGCATTGTGCTCGCTGGTTCTTAATGAAATCACAGTCGTTAAATAGTGTTTCTTCACACTCCCATGGCACAATTCTCTGTGGTCTCTGCAAACGTGACTGTTATGTAGCTTATGTTGACTGTGAATGTCACATGCATCCAGTGTGCCTTCGCCATGATATCAAATCTCTTGACTTCACCTGCGGGAGCAAACACACTCTTTACTTGAGGGAGGATATTCAAGATATGGAAGCTGCGGCCAAGAGATTTGAGCAAGAAGATGGAATATTGGATGAGATAATTAAGCAGACCAAGGCTGACAATAACATTTATTCATATCCCTTGTCAAATATGTTTCAGAGGGCTGAAGCAGATGGATATACTCCTTATTGTGAGTTAAAATTTGATCCTGTAATTATGAGACATTGCTCAGAATCAGAATATCATGAACTCGTGTCGGAGGTTTCTTTCTTTTCTGCTGCATCCACTCTTTGCTCTCTTTCAGATCCTCTTGAGAGTTCTTCTGCTCCTAAAAATGATGAGGGGCGTGCAAACCTAAATCTAGGCGTTGTTAATTCTGAAGACTTTTGTGAAAGAGTGTCCAATAGTGTATGTGAATCTTCAGTATCCCCTGCACGATATCAGGAAAGCTCAAGTAAACCTCGGGGTGATCTATATAGAATGGAGATGAAACCTATTGTGGATAATGAAAGTGATGATTCTGATTCAGGGATATTTAGAGTAAAGCGGCCTTCTTCTCTGAAGGCAGAGAGGAGAAATGGGAATGATGGGATGTCTTCAAAACATTCTGACCACCAGGGACCAAAACGATTGAAGAAAAACCTTCATGAAGGAAGAAGTGGGCAGCCAATGGATTGCTGCAAAACCAGTGAATCAGGTTACAAAATCAGTCACTCTGCAAATCATAAAGTTGACAGCGAAAGTTCCACGAGGGAAAGATATCCAAAGGGTAATAACATTCCCATTTCCATAAGATACAAGAAGCTAGGAAATGAGAACTTATGTAGACAACGAGATCACCACAAGAAAGATTGGTCGCAACAGAGTATTATGGAACCATCTCCCACAGAGATTGGACCAAAGCGCCTTAAAGTCCGAGGCCCTTCATTTCTGGGCTCATAG | 2895 | 0.429 | MPRVSPAQNCTPRVDSNLFLGITLGHASXENGRLDFNLVWTIKHRFGTRDNSIFPATDFSLTEGVGSLCGLISALCSAFYENVASLVVAKGSLLICKIQDRDLGFGSGIWIRFCDFLTKRAKTEAYRERPRNEMVEGRVCLPRGARNVLESLKHKRLQRAKSVTATETSVANMMTRSGGDALRASSSCGVRLHGYADAFSKRKVDKFDMGDLEWTEKIPECPVYSPTKEEFEDPLVYLQKITPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFATRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYMEKEFWNEISYGNMVSVEYACDVDGSAFSLSPTDQLGSSKWNLKKLSRLPKSILRLLETVIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAASEFERVVREHVYTNDILSSEGEVGAFDVLLGKTTLFPPNILLEHEVPVYKAVQQPGEFIVTFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYAHLNRVPLLPHEELLCKEAMLLYTTLELEDSDFPSADLMSHSSIKISFVNLIRFQHCARWFLMKSQSLNSVSSHSHGTILCGLCKRDCYVAYVDCECHMHPVCLRHDIKSLDFTCGSKHTLYLREDIQDMEAAAKRFEQEDGILDEIIKQTKADNNIYSYPLSNMFQRAEADGYTPYCELKFDPVIMRHCSESEYHELVSEVSFFSAASTLCSLSDPLESSSAPKNDEGRANLNLGVVNSEDFCERVSNSVCESSVSPARYQESSSKPRGDLYRMEMKPIVDNESDDSDSGIFRVKRPSSLKAERRNGNDGMSSKHSDHQGPKRLKKNLHEGRSGQPMDCCKTSESGYKISHSANHKVDSESSTRERYPKGNNIPISIRYKKLGNENLCRQRDHHKKDWSQQSIMEPSPTEIGPKRLKVRGPSFLGS | 964 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere13g0972 | 964 | ProSiteProfiles | JmjC domain profile. | 368 | 538 | IPR003347 | - | |
| Dere13g0972 | 964 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 213 | 896 | - | - | |
| Dere13g0972 | 964 | Pfam | C5HC2 zinc finger | 618 | 669 | IPR004198 | - | |
| Dere13g0972 | 964 | Gene3D | Cupin | 221 | 579 | - | - | |
| Dere13g0972 | 964 | MobiDBLite | consensus disorder prediction | 889 | 903 | - | - | |
| Dere13g0972 | 964 | SMART | JmjN_1 | 220 | 261 | IPR003349 | - | |
| Dere13g0972 | 964 | MobiDBLite | consensus disorder prediction | 924 | 964 | - | - | |
| Dere13g0972 | 964 | SUPERFAMILY | Clavaminate synthase-like | 299 | 554 | - | - | |
| Dere13g0972 | 964 | FunFam | Lysine-specific demethylase isoform A | 216 | 565 | - | - | |
| Dere13g0972 | 964 | MobiDBLite | consensus disorder prediction | 924 | 938 | - | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Transcription factors information