Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0970 ATGGAGCTGTTTCCAGCACAGCCAGATTTGTCATTGCAGATAAGTCCTCCAAACACCAAACCCACATCAGGTTGGAGAAATAGCAGTACAGAAGATCAAGTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACACCAGAAGCTCCTTGCTATCATCAATGCCCAAAACTGATACTAACTTGTTCGACCTCTCACTCTCTAACCCATCGACCCCTTCAATTTCTTCCTCTGATATTACTCACCACCACTTCCAGAACGCTCCGTTTCACCCACACTTCACCCAAGACCTGGGATTTCTCAGACCCATCAGAGGAATCCCAGTGTACCAACACCCTCCTCCTCCTCCTCCTTCTGCTCCGGCTCAGCCTTCTCGTCCTCACCATCATCATCATCAGCATCATCCTATTTCGTTCTCTCAAGTTCAGAATCTGGATGCTGCTTCTATTTCTGCAGCATCCAACACGACTACCACAAGTTCGACCCCTTTTCCTTTTCATCATCATAGTCAAGGTTTGATGAGGTCGAGGTTCTTGTCTCATCGCTTCCCTGCCAAGCGCAGCATGAGAGCTCCTAGGATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTTTTGGGTGGCCACGAAAGGGCAACACCCAAATCCGTTCTCGAGCTAATGGATGTCAAGGATCTTACTTTAGCCCATGTCAAATCCCATTTGCAGATGTATCGGACGGTGAAAACTACCGATAGAGCAGCAGCTTCTACAGGGCAATCTGATGTATATGATAATGGTTCATCTGGGGATACTTCTGAAGAATTAATGTTTGACATGAACAATTCAAGAAGACCCGATCTATCTACTAAGCAGGGAAGAAGTGTTAATCAAGAAAAGGAATATCATGGGCTTTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGCAAGCCAAAGGTGATCATGGATTCTGTTGGAACTAATAACGTGACTACTTTTGAGAAGGAGATGGATCGCAAGAGCCTAAGCTATGAGAGAATATCAGACAGAAGCTCATCTTCAAATCTTTCAGGATCAAGCCCCAAGAAGCCTAATTTGGATTTGGAGTTCACATTGGGACAACCTCTTTGA 1122 0.4617 MELFPAQPDLSLQISPPNTKPTSGWRNSSTEDQVDLGFWKRALDTRSSLLSSMPKTDTNLFDLSLSNPSTPSISSSDITHHHFQNAPFHPHFTQDLGFLRPIRGIPVYQHPPPPPPSAPAQPSRPHHHHHQHHPISFSQVQNLDAASISAASNTTTTSSTPFPFHHHSQGLMRSRFLSHRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASTGQSDVYDNGSSGDTSEELMFDMNNSRRPDLSTKQGRSVNQEKEYHGLWSNSSREAWLHGKPKVIMDSVGTNNVTTFEKEMDRKSLSYERISDRSSSSNLSGSSPKKPNLDLEFTLGQPL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0970 373 MobiDBLite consensus disorder prediction 344 361 - -
Dere13g0970 373 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 372 IPR044847 GO:0000976|GO:0006355|GO:0010158
Dere13g0970 373 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Dere13g0970 373 MobiDBLite consensus disorder prediction 341 373 - -
Dere13g0970 373 MobiDBLite consensus disorder prediction 106 122 - -
Dere13g0970 373 SUPERFAMILY Homeodomain-like 187 243 IPR009057 -
Dere13g0970 373 MobiDBLite consensus disorder prediction 11 30 - -
Dere13g0970 373 Pfam Myb-like DNA-binding domain 191 242 IPR001005 -
Dere13g0970 373 Gene3D - 189 246 - -
Dere13g0970 373 MobiDBLite consensus disorder prediction 104 135 - -
Dere13g0970 373 MobiDBLite consensus disorder prediction 248 270 - -
Dere13g0970 373 MobiDBLite consensus disorder prediction 1 30 - -
Dere13g0970 373 FunFam Myb family transcription factor 188 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0970 Dere-ChrDere13 12439658 12443769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0970 1 372 G2-like Transcription Factor Family AT4G17695 39.276 4.59e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere13g0970 Myb_DNA-binding 1.8e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0970 13 12439658 12443769 Dere13g0970 13 12439658 12443769 ECH