Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0961 ATGGAGCGAGAAGCAGAGCAAGAGCAAGATGCTTTCCGTCTCAAAGCCATCGCAGATGCCAAATACAAAAGCTCCAATCTCAAATCTGCTCTGAAATATGCCAAGCGAGCCCAACGCATTGATCCCGACCTCTATGGAATCTCCGAAATGGTCACATCATTTGACATCCTCAGCGTAGCCTCCAAATCCTCCGCTCCCGACTGGTACAAGATACTCCAGGTCGAGCCCTTTGCTCATGTCAACACCATCCGGAAGCAGTACAAGAAGCTAGCTTTGATTCTTCACCCGGACAAGAATCCCCACGTGGCATCCGAGGAGGCATTCAAGCTCGTTAACGAGGCGTTCCGATTTCTGTCTGATAAAATTCGGAGGAAGGAGTACGATATGAAGTTGAGAATTCAAATTCAAGAGGAGGCAACCGAGGGTTTGAAGCAGCAGGGGGAGACTTTCTGGACGGCGTGTTCTACTTGCCGGCTTCTGCATCAGTTTGAGAGGAGGTATGTGGGTCATAATTTGGTGTGTCCTAGTTGTAAGAAGAGTTTCAAGGCTGTGGAGATTGAGAACAGTAATGAGTCTGAGGAGGAGGAGGAGGAAGAAGAGAAGAGGGTTAGGAACAGAAGTGGGAGATTGAGGGTTGCGAGCTTGAGGAGGAAAATGGTTAGTGTGGGGAAATCACGGGGCGTGAAGGGGAAAGTGGGTAGCGAAGAAGTTGAACGTGTGACTATCAAGACTGGAAGATCAAATGGTGAAGTTGGAAGTGTTCAAGTGAGAAATAGGGATTTAGAGAGTGAAAGAGCTATTGGTGAATGGAGTGGGGGAAGATTGAGAAGTGGAGGTTTAAAGAGGAGAATGAGCACTGTTGGGGATGTGTTGGAAAGGTCTAAACCAAAGAAAATTAGAACTGGGGAGGAAATGATGACATTAGCAGAAATGCAGTCCGAAATGAAGAGAAAGGCGCAGCAAAAGAAGGCAACATCAAAGCTAAAGGAAAAGAAGGAGGATAAAACAGAGAAGAGGAGCAAGCAGGAGGAAATACAAGCCGCTTCAAAAAATTCTAGGGGATCCGGGGCTGTCAAACCGAACAGGTTGAAGAGGGTGCAGGTAGTAATTGAGGAGAAGCAAGCATCTTCAAAGAGTAAAGGAGTGAAAATTGAGAAGCACAGTAATATAAGTGGAGGGGACATGGAAAATATGGCAGTGGAGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTAGAGAGAAGCTTTAAGAAAGGCCAGGTGTGGGCAGTTTATGATGATGATGATGGAATGCCAAGGAATTATGCCTTGATTGATGAAGTTGTTTCAGTAAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAACAATGGGGATGAAAAGATAGTTAGTCTGGAGAAAATGGGATTTCATATATCTTGTGGGACCTTTAAAGTTGCCCGGAAGACTTCCATAAATTCTGTAAATATCTTTTCACATGTTGTAGATTGTGAACGGGTAGCTCGTGAGGTTTACAGAATTTATCCAAATAAGGGTTCAGTGTGGGCGCTTTATAATGAGGCAGCTCCTGGTGCAGAGGGAAGAAGTCTTGCTGTTGAGAGCAAGAGGTGCTATGATATTGTTGTATTTTTGACAAGTTATACTGAGATGACTGGATTAAGCATGGCATATCTTGAGAAAGTTAAAGGTTACAAGACAGTATTTAAGAGACAAGAGGTGGGGAGTCATGCTATTAGATTGCTTGAAAGAGATGATCTCTGGTCAGTTTCGCATCAAATTCCTGCACGGAAACTTTCTGGTATTGAAACTCCAGAACTTCTGAGAGAATCTTGGGAACTTGATCCTGCTTCACTTCCTTCTGATTTACTTAGGCTTAAATAA 1890 0.437 MEREAEQEQDAFRLKAIADAKYKSSNLKSALKYAKRAQRIDPDLYGISEMVTSFDILSVASKSSAPDWYKILQVEPFAHVNTIRKQYKKLALILHPDKNPHVASEEAFKLVNEAFRFLSDKIRRKEYDMKLRIQIQEEATEGLKQQGETFWTACSTCRLLHQFERRYVGHNLVCPSCKKSFKAVEIENSNESEEEEEEEEKRVRNRSGRLRVASLRRKMVSVGKSRGVKGKVGSEEVERVTIKTGRSNGEVGSVQVRNRDLESERAIGEWSGGRLRSGGLKRRMSTVGDVLERSKPKKIRTGEEMMTLAEMQSEMKRKAQQKKATSKLKEKKEDKTEKRSKQEEIQAASKNSRGSGAVKPNRLKRVQVVIEEKQASSKSKGVKIEKHSNISGGDMENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVNPFEVRISWLDLQNNGDEKIVSLEKMGFHISCGTFKVARKTSINSVNIFSHVVDCERVAREVYRIYPNKGSVWALYNEAAPGAEGRSLAVESKRCYDIVVFLTSYTEMTGLSMAYLEKVKGYKTVFKRQEVGSHAIRLLERDDLWSVSHQIPARKLSGIETPELLRESWELDPASLPSDLLRLK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0961 629 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Dere13g0961 629 MobiDBLite consensus disorder prediction 315 346 - -
Dere13g0961 629 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Dere13g0961 629 MobiDBLite consensus disorder prediction 312 363 - -
Dere13g0961 629 Coils Coil 328 351 - -
Dere13g0961 629 Pfam DnaJ domain 67 128 IPR001623 -
Dere13g0961 629 Gene3D DnaJ domain 55 156 IPR036869 -
Dere13g0961 629 CDD DnaJ 67 120 IPR001623 -
Dere13g0961 629 MobiDBLite consensus disorder prediction 377 396 - -
Dere13g0961 629 PANTHER BNAC03G44070D PROTEIN 7 622 - -
Dere13g0961 629 Pfam Domain of unknown function (DUF3444) 396 603 IPR024593 -
Dere13g0961 629 Coils Coil 181 206 - -
Dere13g0961 629 SMART dnaj_3 66 123 IPR001623 -
Dere13g0961 629 PRINTS DnaJ domain signature 69 87 IPR001623 -
Dere13g0961 629 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dere13g0961 629 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0961 Dere-ChrDere13 12323380 12325269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0961 13 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.579 1.16e-26 110