Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0960 ATGGGTAGCAGTGAGATAGATAAAACTTCAAAGGAAAAGGAGCCTAAGACACCTCCTGCTACGTCACAGGAGCAGCCTTTGACCACCAGCACTGGAACCCTAAATCCTGAGTGGTCTAGCTTTCAGGCATATTCTCCTATACCTCCACATGGGTACTTGGCATCAAGTCCCCAAGCTCACCCGTATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGTACCCCACCACATCCCTATGTTGCAATGTATCCCCCTGGTGGCATATATGCTCATCCATCCATACCTCCGGGATCATATCCTTTTAGTCCTTTTGCCATGCCTACTTCTAATGGTATTGCTGAGGCTTCAGGAAATACACCTGGTATCATGGAAGGTGATGCTAAACCTCCTGAGGTGAAGGAAAAATTGCCGATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAATATGATCACAGGGAAGAATAGTGAACATGGTAAAGCACCAGGGACATCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGGATGACTCTGAGTTCAAATCAGGAGGCAGGCAGGATTCTTTGGAAGCTGAACCATCTCAAAATGGAAGTTCAATGCATGCTCCTCAGAATGGGGGAGTTACTACACATCATAGAGTGGTTAATCAAACTATGCCGATGTCTGCTGCTGGTGCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGGATGGATTATTGGGGCACACCAACTTCTTCCACTATTCCTGCACTGCGAGGAAAGGTTCCTTCTACTGCAGTTGCTGGAGGGATGGTTACTGCCGGATCACGGGATGGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTACGCAAGCAGGCTGAATGCGATGAACTAGCCCAGCGTGCTGAGGCTTTGAGAGAAGAAAATGAGTCTCTCCGGTCAGAAGTGAGTCGAATTAGGAGTGAGTATGAGCAGTTGCTCTCAGAGAATGCTGCACTCAAGGAGAGACTGGGGGAACTACCAGGGAATGATGATCTTAGGTCCGGCCAAAATGATGAAAAAGTGGTTAATGAAGATGATCAGACTGAGCAGGAGGAGGCTGTGCAGGGTGATCATTAG 1221 0.4693 MGSSEIDKTSKEKEPKTPPATSQEQPLTTSTGTLNPEWSSFQAYSPIPPHGYLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPTSNGIAEASGNTPGIMEGDAKPPEVKEKLPIKRSKGSLGSLNMITGKNSEHGKAPGTSANGIHSKSGESASEGTSEGSDANSQDDSEFKSGGRQDSLEAEPSQNGSSMHAPQNGGVTTHHRVVNQTMPMSAAGAPGAVPGPTTNLNIGMDYWGTPTSSTIPALRGKVPSTAVAGGMVTAGSRDGVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALREENESLRSEVSRIRSEYEQLLSENAALKERLGELPGNDDLRSGQNDEKVVNEDDQTEQEEAVQGDH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0960 406 MobiDBLite consensus disorder prediction 204 224 - -
Dere13g0960 406 MobiDBLite consensus disorder prediction 1 42 - -
Dere13g0960 406 Pfam Disordered region downstream of MFMR 135 269 - -
Dere13g0960 406 SMART brlzneu 302 366 IPR004827 GO:0003700|GO:0006355
Dere13g0960 406 MobiDBLite consensus disorder prediction 303 329 - -
Dere13g0960 406 MobiDBLite consensus disorder prediction 372 391 - -
Dere13g0960 406 CDD bZIP_plant_GBF1 307 357 IPR045314 GO:0003700|GO:0006355
Dere13g0960 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 304 367 IPR004827 GO:0003700|GO:0006355
Dere13g0960 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere13g0960 406 Pfam bZIP transcription factor 302 364 IPR004827 GO:0003700|GO:0006355
Dere13g0960 406 MobiDBLite consensus disorder prediction 120 224 - -
Dere13g0960 406 Gene3D - 305 359 - -
Dere13g0960 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 309 324 IPR004827 GO:0003700|GO:0006355
Dere13g0960 406 MobiDBLite consensus disorder prediction 370 406 - -
Dere13g0960 406 MobiDBLite consensus disorder prediction 1 18 - -
Dere13g0960 406 MobiDBLite consensus disorder prediction 146 189 - -
Dere13g0960 406 SUPERFAMILY Leucine zipper domain 305 361 IPR046347 GO:0003700|GO:0006355
Dere13g0960 406 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Dere13g0960 406 Coils Coil 322 370 - -
Dere13g0960 406 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0960 Dere-ChrDere13 12313150 12321147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0960 1 375 bZIP Transcription Factor Family AT2G35530 66.580 2.85e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere13g0960 MFMR_assoc 5.5e-56 No_clan