Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0959 ATGGGTTACGAAAACGACCCGTATCGGGACGAGGATGGAGAGCCGTTGATGGACTATGATGACGTACAATACGATCGCGAGCTATCTCCCGAACCCCATCAGCAAGGACTACTCGACGATTTGGAGGAAGACGTTGATGATTGGCGTGGGCGAGAGCGATCGCAGACTCCAGTCTACGATAATGATTCGTCCATGTCAAAGTCGAAGCCAAGGAAGAGGCTTATCAAGAAAAGTGACACTGGGAGGCATGCTGTGGCGCCTGAACTTGCAGATGAAGAGGAGGATGATGAGGGTAATCTTCCGGCTAGTTTTGTGAGGGACGGTTCTGAGGAGGGGGAAGGAAGAAAGAGGAAGGGAAAGGATGTTGGCAGTGGGAAGAAGGAGAAGAGGCATAAAGGGGAGAAGAAGTTCGGGAGCAGTGGTAAGGGCGGCTCCAAATCTGTGTTATCGAAGAAAGGGTTTGCGGGTAAGGCAGGGAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGTGGGGACTCAGAGGAAGATCAGGAGGGTGTCAGGACGGTTGATGATGATAACTTCATAGATGACAGTGGAGTGGATCCTGCTTTATATGGCAGTGATAACGAACCCCGTTCTCCTGGTCAATATGCCCAGGCAGAGGAAGGTGAGGAGGATGATGAGATTAAAGATCTTTTCAAGATGGGTAAGAAAAAGAAGAAGAACGAGAGAAGTCCTGCAGAGATAGCCTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACTGCTGAAGAGGATGCTGAACTTAATAGACAGGGAAAGCCCGCCATCAACAAGCTCAAGAAGTTGCCTCTTTTAACCGAAGTCCTCTCAAAGAAACAACTTCAACAAGAGTTTTTAGATCATGGTGTGCTTACCTTATTGAAGAATTGGCTTGAACCCCTCCCAGATGGAAGCTTACCAAACATAAACATCCGCACGGCAATTTTAAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTGTCAAAGTCTGATGAGGAAATCAGTGTAAATAGGAAACTAGCTAAGGAATTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACAAGATTTGAAGACATGAGAAATATGGATGATGACAGGGTTCCTTATAGAAGGCCATCAGTTAAAAAGCCTGCAAATAAAGCTTCAGGAATGGAATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAGCGCAAGTCTGGACAGTCCTCTTCCAGGCAGCTCACAACAAGACCAGAAGCAACACCATTGGATTTTGTGGTGCGTCCCCCTTCTAAAGTTGATCCAGAAGAAGTCAGAGCTCGTGCAAAACAAGCTGCACAAGATCAGCACCGTATGAAGATGAATAAGAAGCTACAGCAATTGAGGGCGCCAAAAAAGAGGCAGCTTCAAGCCACAAAGTTGAGTGTGGAAGGTCGAGGTATGCTGAAGTATTTGTAA 1551 0.4545 MGYENDPYRDEDGEPLMDYDDVQYDRELSPEPHQQGLLDDLEEDVDDWRGRERSQTPVYDNDSSMSKSKPRKRLIKKSDTGRHAVAPELADEEEDDEGNLPASFVRDGSEEGEGRKRKGKDVGSGKKEKRHKGEKKFGSSGKGGSKSVLSKKGFAGKAGKDHDGDVKEMWDTIAGGDSEEDQEGVRTVDDDNFIDDSGVDPALYGSDNEPRSPGQYAQAEEGEEDDEIKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNMDDDRVPYRRPSVKKPANKASGMESRDGDLDLEFSQRKSGQSSSRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQHRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMLKYL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0959 516 PANTHER PROTEIN IWS1 HOMOLOG 1 1 516 IPR044204 GO:0009742|GO:0032784
Dere13g0959 516 Pfam TFIIS helical bundle-like domain 332 386 IPR017923 -
Dere13g0959 516 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 245 392 IPR035441 -
Dere13g0959 516 MobiDBLite consensus disorder prediction 19 56 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 461 486 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 1 226 - -
Dere13g0959 516 ProSiteProfiles TFIIS N-terminal domain profile. 306 389 IPR017923 -
Dere13g0959 516 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 299 389 IPR035441 -
Dere13g0959 516 Coils Coil 252 272 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 398 501 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 155 193 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 433 449 - -
Dere13g0959 516 MobiDBLite consensus disorder prediction 418 432 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere13g0959 Med26 2.3e-13 No_clan