Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0934 ATGGATAGGGGCTATGAAGGAGGAGGTAATTATGAGTACGAGAATGGGGTGGTTATGACCAGAGACCCCAAGCCCAGGCTCAGATGGACGGCTGATCTTCACGATCGCTTTGTTGACGCCGTCACCAAGCTTGGTGGCCCCGATAAAGCGACTCCTAAGTCTGTATTGAGGCTAATGGGCTTGAAGGGTTTGACTTTGTATCATTTGAAGAGTCATTTACAGAAATATAGACTTGGACAGCAGGCCCAAAAGCAGAACACCGAAGAACAACACAAAGAGAACAATAGAGGTTCGTATGTACATTTCAGTAATCGTTCTTTGGGGCCAAACACCAATTACAGATGCAGTAACCAAACTGAGGAAATTCCAATAGCAGAGGCACTGCAGCGTGGGATTGAAGTTCAAAAGCAATTGGAAGAGCAGCTTGAGGTTCAGAAGAAATTGCAATTGAGAATAGAGGCTCAAGGGAAATACTTGCAAGCCATGCTGGAGAAAGCACAGAAGAGCCTTTCCCTGGACATGAAGGGACCAAGCAGCTTAGAAGTAGCAAGAGCTCAGTTGACAGACTTCAATTCTGCTTTGTCCAATTTCATGGAGAACATGAACAAAGATACCAAAGAAAACTTAACAGACATGAATAATTTCTACAAGAAGACCCATAATTCATCAGCTTTCGGAATTTACCAGGAAGGAGAGGGAGAAGATCATAAGGATCATAAGCCAAAGGTTGAAGAGGGTTCAATACAGTTTGACTTGAACATCAAAGGTAGCTATGACTTTGCGTCTGCAGGTGCAGCTGAAATGGATTCCAAGATGCTAACGTACAGAGTGTAA 834 0.4376 MDRGYEGGGNYEYENGVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQAQKQNTEEQHKENNRGSYVHFSNRSLGPNTNYRCSNQTEEIPIAEALQRGIEVQKQLEEQLEVQKKLQLRIEAQGKYLQAMLEKAQKSLSLDMKGPSSLEVARAQLTDFNSALSNFMENMNKDTKENLTDMNNFYKKTHNSSAFGIYQEGEGEDHKDHKPKVEEGSIQFDLNIKGSYDFASAGAAEMDSKMLTYRV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0934 277 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Dere13g0934 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 228 IPR044848 GO:0003700
Dere13g0934 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Dere13g0934 277 Pfam MYB-CC type transfactor, LHEQLE motif 123 169 IPR025756 -
Dere13g0934 277 FunFam Myb family transcription factor 23 81 - -
Dere13g0934 277 MobiDBLite consensus disorder prediction 81 104 - -
Dere13g0934 277 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Dere13g0934 277 Gene3D - 23 81 - -
Dere13g0934 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0934 Dere-ChrDere13 11956761 11959107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0934 5 190 G2-like Transcription Factor Family AT4G13640 50.265 2.80e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere13g0934 Myb_DNA-binding 2.1e-07 CL0123