Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0918 ATGACAGCCAATCAGATTCGACCACGTAGGCTACTTACGGCACACGTTAGAGATCCCGCCTCTTACATCAAACCTAGACATGTGGACCCAAATGTCCTGTCTGCCCTCGACCATTTGTTTTCGCCCTTCACCCTTAACGGTTTCTCGTTCACGGACACGAAGAAGGAAAAGATTGAAAAAGTAAAGATGTTTACATGCATAGCGTGTACGAAGCAATTGGCGGAGGAGAGGGAAATTGGAGGAGGAGCCCGTGAGAGCGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCACTGAAGGTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTTATAAGAAAGGGCAGAGACCTTATCCAGATTTTGATAACATCTCTGAAGGAGTTCCATACCCTTATATGGGAGGGGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTACGAGCTCCCATTACCCGGCTGGTGGATCTGACCCAAGATTTGGTGGGCTATTTGGTGGTGAACGAACCCCCAGAGGACGTGAATCAGCATCAGTCTGCGATGTAGTGTTAGAGAACGAGAATGAACCCAAGGAGTGGATGGCACAGGTTGAACCAGGGGTTCACATTACATTTGTGTCTCTTCCGCATGGGGGAAATGATCTCAAAAGAATTCGCTTTAGCCGAGAGATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAATCTCTTAACACTCCTTCAAGATCTGAAGATGAGCAAAGAGATTCTTCTTACTCGAGACTGGGATCTGCACGAGATAGCCCCATGACCTCATTAAACAAGGAGTGGACGCCGAGGAACTACCCTAAAACCACAGGAAATAAAGGGTACTACGCGTCTGAACCTTCGGATCAAGGTGGTGGCCCCCATTTCCATGGAGCGTCTTCGTTGGAAGCATCACGGACAACAACCTCTTCAAGAGATGAACCTTCTGTTAGCAATGGCAGTGACATGGAGACAGAATGGGTAGAGCAAGATGAGCCTGGAGTGTACATTACAATCAGACAGTTACCAGACGGCACAAGGGAGCTTCGACGTGTCAGATTCAGCCGTGAAAGATTTGGGGAGGTACATGCCAAGAATTGGTGGGAGGAGAACAGAGAAAGAATACAAGCCCAATACCTTTGA 1242 0.4791 MTANQIRPRRLLTAHVRDPASYIKPRHVDPNVLSALDHLFSPFTLNGFSFTDTKKEKIEKVKMFTCIACTKQLAEEREIGGGARESGTPSTKEAVKSLTTQIKDMALKVSGAYKQCKPCTGSSSYKKGQRPYPDFDNISEGVPYPYMGGASSSSTPAWDFTSSHYPAGGSDPRFGGLFGGERTPRGRESASVCDVVLENENEPKEWMAQVEPGVHITFVSLPHGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQSLNTPSRSEDEQRDSSYSRLGSARDSPMTSLNKEWTPRNYPKTTGNKGYYASEPSDQGGGPHFHGASSLEASRTTTSSRDEPSVSNGSDMETEWVEQDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0918 413 ProSiteProfiles BRX domain profile. 204 259 IPR013591 -
Dere13g0918 413 MobiDBLite consensus disorder prediction 268 363 - -
Dere13g0918 413 Pfam Transcription factor BRX N-terminal domain 85 119 IPR027988 -
Dere13g0918 413 MobiDBLite consensus disorder prediction 334 357 - -
Dere13g0918 413 MobiDBLite consensus disorder prediction 285 317 - -
Dere13g0918 413 ProSiteProfiles BRX domain profile. 358 413 IPR013591 -
Dere13g0918 413 PANTHER PROTEIN BREVIS RADIX-LIKE 1 63 413 IPR044532 -
Dere13g0918 413 Pfam Transcription factor regulating root and shoot growth via Pin3 204 258 IPR013591 -
Dere13g0918 413 Pfam Transcription factor regulating root and shoot growth via Pin3 357 412 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0918 Dere-ChrDere13 11732142 11738277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0918 62 413 Major Intrinsic Protein MIP AT1G31880 67.227 4.37e-165 466