Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0910 ATGGAGGTCAGTGAGAATGAGAGCACGTCAGGTGGTCGTGAGTTCTATGCAAATGGAATTCACATGAGCACAGCAGAAGTTGAAGCGAAGCTTGACCAGGGAAATATTCAGGAGGCAGAATCTGCATTGAAAGAAGGGTTATCTATCACTTCTGAGGAAGCAAGAACTCTTCTTGGGAAGTTAGAGTATCAGAGAGGTAATTTAGCGGGTGTTCTCTGTGTGTTTGATGGGGTTGATCTTCAAGCTGCCATACAGCAATTACAATCTTTAGTTTCTGAGAAATTATCAGCCAAGAAAACACGCCCGCGTCCTGAATCACCTACCACAGTCTCTCGGCATGCTGCTTGTTTGATGCTTGAATCCATCTACTTTAAAGCAAAAGCTCTACGAAATCAGGGGAAAATAGCTGAAGCGACTACCGAATGCAAAAGTGTGCTTGAAGGTATTGAGAAGACATTTAATCAGGGTGTATCTGATATTCAATTGGACATTAAATTGCAAGAAGTAGTGAGTAGCATTGTAGGGCTCCTTCCAGAGCTTATAATACAAGCTGGTAGCTATCAGGAGGCGTTGTCTGCTTATAGGCGTGCCCTTCAACTTCTAAGTCAATGGAACTTCGATACTGATGGCTGTATTAGAATTCAGAAAAGACTTGCTATGTTTTTGCTATACAGTGGGTTGGAGGCCAGCCCACCCAGTGTAACAGGTCAGACCGAAGGGTCTTATGTGCCTAAAAATAATCTAGAAGAGGCAGTTCTGCTTCTAATGCTCGCTGTGAGGAAACTTTGCGTTGACAAGACCAGATGGGAACCTTCATTGATGGAACACCTGACTTTTGCACTTTCTATATGTGGCCAAACTTCTGTTTTGGCAAAACAACTGGAAGAGTTAATGCCTGGATTATATCATCGTATTGACCGTTGGAATTATTTAGCTTTGTGTCTCAGTGGAGCTGGACAAAAGAAAAGTGCTTTGGATCTGCTTAGGAAATCTTTGCACAAACACGAAAGGCCAAATGACCTTGTGTCATTGTTATTGGCTGCCAGGATCTGCAGCGAGGATCCTCATGTTGCTGCTGAGGGAGTGCAGTATGCACAAAGGGCAGTCAAAAATGCTAAGGGCATACATGAGCATTTAAAAGGGGTGGGTCTTCGGATGTTGGGACTTTGTCTGAGACAGCAAGCTAAGGTTGCTTCCTCTGACTTTCAGAGGTCTAATCTTCAATCCAAAGCTCTGAAATCATTAGAGGGGGCTATGGGATATGAACAAAACAATTCTGATCTGATTTTTGAGTTGGGCGTTCAATATGCAGAGCACCGCAATTTGACAGCTTCTTTGCGCTATGCAAAGCAGTTCTTCGATGAAACAGGTGGCTCTATATTGAAAGGTTGGAGATTGCTTGCTCTGGTTTTGTCTGCTCAGCAACGATTCATGGAGGCCGAAGTGGTGACAAATGCTGCTTTGGATGAGACCGCAAAATGGGAGCAGGGGCCACTGCTTAGACTGAAAGCAAAGCTGAAGATCTCCCAATCACAACCCATGGATGCTATTGAGACTTATAGGTACCTCCTTGCATTGATTCAAGCCCAGAGGAATTCCTTTGGGCCTCTGAAAATAAATACACAGGTTCAGGATGATGTAAATGAAATTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTGAAGGAGTACTCAGCAGAAACAATTCACACTGAAGGTCTTATGTCTCAAGGACGTGGGCAACAACACGAAGCTATTGCTGCTACCACGAACTCTCTCCTACTTGAACCAAACTATGTTCCAGGCAAGATCCTGATGAGTGTTCTGATGCTAAAATTGGAATCTAGGTCAAAGTCTTTGCCTGTAGCAAGAAGCTTACTTTCTGATGCACTTCGTTTAGAACCCACTAACCGCATGGCTTGGTATTACTTGGGAAAAGTTCACAAGGATGATGGCCGAATAGGAGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGATCCTATTGAAAGTTTCAGCTCTATTCTTTGA 2097 0.4368 MEVSENESTSGGREFYANGIHMSTAEVEAKLDQGNIQEAESALKEGLSITSEEARTLLGKLEYQRGNLAGVLCVFDGVDLQAAIQQLQSLVSEKLSAKKTRPRPESPTTVSRHAACLMLESIYFKAKALRNQGKIAEATTECKSVLEGIEKTFNQGVSDIQLDIKLQEVVSSIVGLLPELIIQAGSYQEALSAYRRALQLLSQWNFDTDGCIRIQKRLAMFLLYSGLEASPPSVTGQTEGSYVPKNNLEEAVLLLMLAVRKLCVDKTRWEPSLMEHLTFALSICGQTSVLAKQLEELMPGLYHRIDRWNYLALCLSGAGQKKSALDLLRKSLHKHERPNDLVSLLLAARICSEDPHVAAEGVQYAQRAVKNAKGIHEHLKGVGLRMLGLCLRQQAKVASSDFQRSNLQSKALKSLEGAMGYEQNNSDLIFELGVQYAEHRNLTASLRYAKQFFDETGGSILKGWRLLALVLSAQQRFMEAEVVTNAALDETAKWEQGPLLRLKAKLKISQSQPMDAIETYRYLLALIQAQRNSFGPLKINTQVQDDVNEIDVWHGLANLYASLSHWKDAEVCLQKARELKEYSAETIHTEGLMSQGRGQQHEAIAATTNSLLLEPNYVPGKILMSVLMLKLESRSKSLPVARSLLSDALRLEPTNRMAWYYLGKVHKDDGRIGDAADCFQAASMLEESDPIESFSSIL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0910 698 Gene3D Tetratricopeptide repeat domain 630 694 IPR011990 GO:0005515
Dere13g0910 698 PANTHER PROTEIN NPG1 7 695 IPR043376 -
Dere13g0910 698 Gene3D Tetratricopeptide repeat domain 456 618 IPR011990 GO:0005515
Dere13g0910 698 SUPERFAMILY TPR-like 500 686 IPR011990 GO:0005515
Dere13g0910 698 Gene3D Tetratricopeptide repeat domain 240 455 IPR011990 GO:0005515
Dere13g0910 698 Gene3D Tetratricopeptide repeat domain 20 206 IPR011990 GO:0005515
Dere13g0910 698 SMART tpr_5 656 689 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 550 583 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 584 617 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 305 338 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 171 204 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 119 152 IPR019734 GO:0005515
Dere13g0910 698 SMART tpr_5 461 494 IPR019734 GO:0005515
Dere13g0910 698 SUPERFAMILY TPR-like 123 453 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0910 Dere-ChrDere13 11635792 11640534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0910 13 698 Calmodulin-binding Proteins AT2G43040 67.199 0.0 910