Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0908 ATGGTTAAGCATAACAATGTTATCCCTAGTAGCCACTTCCGAAAGCATTGGCAAAATTATGTGAAGACTTGGTTCAATCAACCAGCAAGGAAGACAAGAAGACGGTTAGCTCGCCAAAAGAAAGCTGTTAAGATCTTCCCTAGGCCAACTGCTGGACCTCTAAGGCCTATTGTTCATGGTCAAACTTTGAAATACAACATGAAGACCAGAGCTGGCAGAGGATTTTCTCTCGAAGAACTAAAGGCTGCTGCTATTCCCAAGAAGCTTGCTCCAACCATTGGCATTGCAGTTGATCACCGCCGCAGGAACCGATCTTTGGAAAGTCTCCAAGCTAATGTTCAGAGGCTGAAAACATACAAGGCCAAGCTGGTTGTGTTCCCAAGACGGGCACGCAAGGTCAAGGCTGGTGATTCTACACCGGAGGAACTTGCAAATGCCACACAAGTTCAGGGTCCGTACATGTCCATTGTGAGGGAGAAGCCATCTGTGGAGCTTGTTAAGGTTACGGATGAAATGAAAGCATTCAAGGCTTATAACAAGCTTCGGCTTGAACGCACCAACGAACGTCATATTGGTGCCAGGTTGAAAAGGGCTGCTGAAGCGGAAAAGGAAGAAAAAAAGTGA 624 0.4631 MVKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKTRAGRGFSLEELKAAAIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRARKVKAGDSTPEELANATQVQGPYMSIVREKPSVELVKVTDEMKAFKAYNKLRLERTNERHIGARLKRAAEAEKEEKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0908 207 Gene3D - 167 207 - -
Dere13g0908 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere13g0908 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere13g0908 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere13g0908 207 FunFam 60S ribosomal protein L13 166 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0908 Dere-ChrDere13 11596276 11597740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0908 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 84.293 4.99e-124 347