Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0899 ATGTTCGGAGGCGGAGGAGAGGAGGCCTTGGCCAGCTTGGGGATGATGACGCGGTCCCTCCTCAATCCAGCCACTTCGTCGGTGATATCCGGTGAGATATCCCCGTCGACCGCCGCTGCGCCGGTGAGGGATGACAGGAGTCCAGCTCAGCCGCAGTGGAGCCAGCAGGAGACGCGCGAGTTCATAGCGATCCGCGCGGAATTGGAGCGGGACTTTACTTCGTCTAAGCGAAACAAGACACTCTGGGAGGTCGTCAGCGCCAAAATGAGGGAGAGAGGCTTCAGAAGGAGTCCCGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGCTATAAGGGGAAAGAGACATCTGATCCAGAGCATGGGAGACAATGTCCCTTTTTTGAAGAATTACATGCAATCTTTGCTCAAAGAGAACAGAACATGCAGCGGTTACTTCTTGAATCTGAGACCCGTTCAACTCACTCAAAGAAGGGGATGAAAAGACTAAGTGGAGATCGGTCATCGGAGGAATTTTCCGAAGATGATGATGAGGTTGAAGATGACAGTGAAGATGAGAGACCTACTAGAAGCAACTCTCGCAAAAGGAAAGCTGACAAAGTTGTAACAGAAAAGTCTTCTAGAGCCAATATGACAAATGCTATAAGTAATACTGCCAGTAGCATTCAGGAAATGCTTAAGGAATATTTCCAGCAGCAGTTGAGGATGGAGCTGCAGTGGAGGGAGATGATGGAAAGGCGTGCCCATGAAAGGCAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCATGGAGGGAGAGGGAAGAGCAGAGGAGAATGAGAGAAGAGAGCCGAGCAGAAAGGAGGGATGCATTGATGACAACCCTTTTGAACAAACTCATCCATGAATCTAACTAG 936 0.4957 MFGGGGEEALASLGMMTRSLLNPATSSVISGEISPSTAAAPVRDDRSPAQPQWSQQETREFIAIRAELERDFTSSKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQREQNMQRLLLESETRSTHSKKGMKRLSGDRSSEEFSEDDDEVEDDSEDERPTRSNSRKRKADKVVTEKSSRANMTNAISNTASSIQEMLKEYFQQQLRMELQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRMREESRAERRDALMTTLLNKLIHESN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0899 311 SMART sant 49 111 IPR001005 -
Dere13g0899 311 MobiDBLite consensus disorder prediction 186 205 - -
Dere13g0899 311 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Dere13g0899 311 MobiDBLite consensus disorder prediction 26 57 - -
Dere13g0899 311 MobiDBLite consensus disorder prediction 150 209 - -
Dere13g0899 311 PANTHER FI21293P1 46 308 - -
Dere13g0899 311 Coils Coil 256 276 - -
Dere13g0899 311 Gene3D - 53 114 - -
Dere13g0899 311 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Dere13g0899 311 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Dere13g0899 311 MobiDBLite consensus disorder prediction 151 170 - -
Dere13g0899 311 CDD GT1 51 116 - -
Dere13g0899 311 MobiDBLite consensus disorder prediction 171 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0899 Dere-ChrDere13 11406557 11408105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0899 34 306 Trihelix Transcription Factor Family AT2G38250 44.043 6.73e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere13g0899 Myb_DNA-bind_4 6.5e-23 CL0123