Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0890 ATGGCGGGCCAGTCTCGGAAGTGGATGATTCTGGTGGCCACAATATGGATTCAGGCGTTCACCGGCACCAATTTCGATTTCTCGGAGTACTCCTCGTCGCTGAAATCTGTACTGCGCATTTCCCAGGTCCAATTGAACTACCTGGCCACTGCAAATGACATGGGGAAACTGTTCGGGTGGTCGTCGGGGTTGGCTCTCGCCCATTTGCCGATGTCGCTGGTACTGTTTATGGCGGCGTTCATGGGCTTCATCGGTTATGGCGTCCAATGGCTCCTCCTCGAGAACATCATCTCTTTGCCTTATTTTGTGGTGTTTCTTCTCTGTTTGTTGGCTGGTTGTAGCATCTGTTGGTTCAACACTGTATGCTTTGTTCTGTGCATTAGGAATTTCCCAGTCAATAGACCCCTTGCACTGTCACTCACCGTGAGCTTCAACGGCGTAAGTGCAGCACTTTACACCCTCGCTGCCAATTCAATAAACCCTTCATCTGATTCTCTGTATCTCCTTCTGAATGCTCTTGTACCCCTTCTTACTTCCGTTGCAGCACTTATCCCAATCCTTCGCCAACCACCTTTAGACCCGCTTCCTCCTGATGCAGTTCATAGAGATTCATTCATATTCCTAATGTTAAACTTCTTAGCCATATTCACCGGCCTTTATCTCCTTCTCTTCGGTTCATCTACCTCTGATGCAGCAACAGCTCGCCTCTTCTTCTGTGGTGCTATTTTCCTCCTCATTTGTCCATTATGCATTCCTGGTGTTATCTATGCTCGAGAATGGTTTCGCCGTGCTATCCATTCTAGCTTTCAGATGGAAGGCTCAGGCTTCATTCTTGTACATGTGGGCGACCTTGAGCTTCACAAGGAACTCCTTACCCGTCAGAATACTACTCTTAGCAACGGAGATTCTCACAGCTTGCTGAGTGACAATAATAATGGGTCCACATATGGAAGTCAGAAGGCAAAAGACACTAATGGGTGTTGTGAGAGGTTCATTGGACATGATCAGTTGGTAGTGCTCGGAGAAGAGCACCCAGCTTCAGTGGTAGTTCGTAGGTTGGACTTTTGGCTTTACTGTGTTGCTTACTTTTGCGGAGGCACAATCGGTCTTGTCTACAGCAATAATCTAGGACAGATTGCCCAATCTCTTGGAATGAGTTCAAGTACTTCTACCCTCGTCACACTTTATTCTACCTTCTCCTTTTTTGGTCGCCTGCTTTCGGCTGGACCAGACTATATTCGTAATAAATTCTACTTTGCAAGGACAGGATGGTTAACCATTGCCCTGATACCAACCCCAATCGCTTTCTTCTTGCTTGCTTCATCAGACAGTTATCTGGCGCTTCATGCAGGCACTGCTTTAATTGGGTTCAGCTCTGGGTTCATATTTGCTGCTGCTGTATCAGTTACATCTGAGCTATTTGGACCTAACAGTGTGGGAGTTAATCATAACATTCTCATTACAAACATCCCAATTGGGTCCCTTCTCTATGGCTTGTTAGCTGCAGTAGTTTATGATGCCAATGCGCGGTCTTTGACGCTTGGAATAGGAAATTTAGCAATGTCTGATTCAGTAGTGTGCATGGGAAGGCAGTGCTACTTCTGGACATTCATTACTTGGGCATGCTTATCTATCCTGGGTCTAGCTTCTAGTGTGCTCTTGTTCTTAAGAACCAAACATGCCTATGTTCATTTTGAAAGGCACCGTATTTCAACCCAAACGAGTATTATATCTTAA 1737 0.4594 MAGQSRKWMILVATIWIQAFTGTNFDFSEYSSSLKSVLRISQVQLNYLATANDMGKLFGWSSGLALAHLPMSLVLFMAAFMGFIGYGVQWLLLENIISLPYFVVFLLCLLAGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDSLYLLLNALVPLLTSVAALIPILRQPPLDPLPPDAVHRDSFIFLMLNFLAIFTGLYLLLFGSSTSDAATARLFFCGAIFLLICPLCIPGVIYAREWFRRAIHSSFQMEGSGFILVHVGDLELHKELLTRQNTTLSNGDSHSLLSDNNNGSTYGSQKAKDTNGCCERFIGHDQLVVLGEEHPASVVVRRLDFWLYCVAYFCGGTIGLVYSNNLGQIAQSLGMSSSTSTLVTLYSTFSFFGRLLSAGPDYIRNKFYFARTGWLTIALIPTPIAFFLLASSDSYLALHAGTALIGFSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGLLAAVVYDANARSLTLGIGNLAMSDSVVCMGRQCYFWTFITWACLSILGLASSVLLFLRTKHAYVHFERHRISTQTSIIS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0890 578 Gene3D MFS general substrate transporter like domains 353 576 IPR036259 -
Dere13g0890 578 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 563 - -
Dere13g0890 578 SUPERFAMILY MFS general substrate transporter 206 560 IPR036259 -
Dere13g0890 578 Pfam Nodulin-like 7 252 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0890 Dere-ChrDere13 11293599 11298897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0890 1 575 Nodulin-like Gene Family AT1G31470 58.406 0.0 613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1269 09 16652325 16657370 Dere13g0890 13 11293599 11298897 CCT
Dere13g0890 13 11293599 11298897 Dere13g0890 13 11293599 11298897 ECH