Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0873 ATGCCACAAAACTGCATGGCTCCAAGGCCAGAGATGAGTAGTGGTCGCCATAACTCTACTGTCCTCAGTCAACAATCCTTAACAAAACTCACTTTGTACCCCGTAACTTTGAAGTTCGAGGAGTTGGTGTACAAAGTAAAACTAGAGCAGAAAGGACTGTGTTGGGGGAGTACATGGGCTCCTAGAGAAAAGACCATATTGGATGGGATTACAGGCATGGTATGCCCAGGAGAGATTCTGGCCATGCTGGGCCCATCCGGTAGTGGCAAAACCACACTTCTCACAGCTCTTGGAGGTCGTTTAAATGGAAAATTATATGGGAAAATCACATACAACAATCAGCCTTTCTCAGGTTCCATAAAAAGAAGAACAGGTTTTGTGGCACAGGATGATGTTCTATACCCACATCTCACTGTTTCTGAAACTCTGATTTTCACTGCACTTCTGAGGCTTCCGAATAGTCTGACGAGGGATGACAAGATTGCTTATGTGGAGCGAGTTATTGCAGAACTAGGCCTGAATCAATGCAGAAACAGCATGATAGGAGGCCCTCTTGTGAGAGGAATATCAGGAGGGGAGAAGAAGAGGGTGAGCATAGGTCAGGAAATGCTCATCAATCCCAGCTTGGTGCTGCTAGACGAGCCCACTTCAGGTTTGGACTCCACCACGGCTCAGAGGATCATGAACACAATCAAAGCCATGGCCAATGGAGGGAGAACTGTGATCACCACCATTCACCAGCCCTCTAGCCGTCTCTACCATATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGCCGACCCATATATTATGGCCTTGCTTCAGCAGCCATGGACTATTTCTCATCTATTGGTTTTTCCGCATCCATCGCTCTCAATCCTGCTGATTTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGACTCCAAGCATGTAAGTGAACAAAGTGAGAGCCTGGAACAAGAAAGGAAGCTGATTAGAGAAGCTCTCGTCTCTGCTTATGAGAAGAACACAGCAACTAGGTTGAGAGATGATATTTCGAACTTGGAGATGAACAACTACAACTTCACCAAGGATGCTTCAACTGGAATTGGTTCAGGAAATGACGTAATGCCAGAGCAATGGTGCACAAGCTGGTGGTATCAGTTCAAGGTCTTGTTACATAGGGGGCTCAGAGAACGAAGGTATGAAGCTTTCAATAGGTTGAGAATGTTCCAAGTCATGAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCTCACATTCAAGACCGGGTAGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTTTACCCTCTGTACAATGCAGTTTTCACATTCCCTCAAGAAAGAAGAATGCTGGTCAAGGAGCGATCTTCAGGAATGTATCGCCTGTCTTCTTACTTTCTAGCCAGAACAATAGGAGACATGCCATTGGAGCTTGCACTTCCTACTGCATTTGTCTTCATACTCTATTGGATGGGAGGGCTTAAGCCTCATCCTGTGACTTTCATCCTTTCACTTCTTGTAGTTCTCTACAGTGTTCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTCTCATGGAGATCAAACAGGCCACAACTCTTGCTTCTGTCACAACCCTTGTGTTTCTCATTGCTGGAGGATACTACGTACAACAGATCCCTCCCTTCATAATGTGGCTCAAATACTTAAGCTACAGCTACTATAGCTACAAGCTTCTTCTGGGTGTTCAGTACAATGAAGATGATTACTACGAGTGCTCAAATGGGGTTTTGTGCAGAGTTGCAGATTTCCCTCCAATCAAGTCAATGAGTTTGAATCATTTGTGGGTTGATGTGCTTATTATGGCTCTTATGTTAATGGGTTATCGACTACTTGCTTATTTAGCACTGCACAGAGTGAGGATAAAAACCAATTTAAGGAATAGAAAAGGTGATGACAGTGACCAGATGCTAAAGGGTGAGTACTCTTTATCTGAGGAATTCAATGCTGGATCAATATGA 2025 0.4454 MPQNCMAPRPEMSSGRHNSTVLSQQSLTKLTLYPVTLKFEELVYKVKLEQKGLCWGSTWAPREKTILDGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLYGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVSETLIFTALLRLPNSLTRDDKIAYVERVIAELGLNQCRNSMIGGPLVRGISGGEKKRVSIGQEMLINPSLVLLDEPTSGLDSTTAQRIMNTIKAMANGGRTVITTIHQPSSRLYHMFDKVVLLSEGRPIYYGLASAAMDYFSSIGFSASIALNPADFLLDLANGIAPDSKHVSEQSESLEQERKLIREALVSAYEKNTATRLRDDISNLEMNNYNFTKDASTGIGSGNDVMPEQWCTSWWYQFKVLLHRGLRERRYEAFNRLRMFQVMSVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLVKERSSGMYRLSSYFLARTIGDMPLELALPTAFVFILYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIMWLKYLSYSYYSYKLLLGVQYNEDDYYECSNGVLCRVADFPPIKSMSLNHLWVDVLIMALMLMGYRLLAYLALHRVRIKTNLRNRKGDDSDQMLKGEYSLSEEFNAGSI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0873 674 CDD ABCG_EPDR 34 271 - -
Dere13g0873 674 MobiDBLite consensus disorder prediction 1 20 - -
Dere13g0873 674 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
Dere13g0873 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 635 - -
Dere13g0873 674 Gene3D - 55 283 IPR027417 -
Dere13g0873 674 SMART AAA_5 76 266 IPR003593 GO:0016887
Dere13g0873 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 289 IPR003439 GO:0005524
Dere13g0873 674 Pfam ABC transporter 67 217 IPR003439 GO:0005524
Dere13g0873 674 Pfam ABC-2 type transporter 246 331 IPR043926 GO:0140359
Dere13g0873 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 281 IPR027417 -
Dere13g0873 674 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524|GO:0016887
Dere13g0873 674 FunFam ABC transporter G family member 22 54 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0873 Dere-ChrDere13 11023758 11026958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0873 77 266 Calmodulin-binding Proteins AT2G36910 25.500 5.27e-09 57.8