Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0872 ATGGCGGCAGTAGCAGGATCGCTAGCCGCAGCGGGAGATATATCGAAGGCCCATATGGCTTTGGTGATGGTTCAGCTATTCAATGGAGGCTACCATGTCGTCACTAAAGTAGCCCTCAATGTTGGGGTCAACCAGTTAGTCTTCTGCGTCTTCCGCGATCTCCTTGCCCTCGCTATTCTTGCTCCCATCGCTTACATCCGTGAAAGGCGGACACGACCTCCCATGACTAAGCGCCTCCTGATATCATTCTTTTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAGCCAGCAATTCCAGTCTTTACGTTTCTTTTGGCTGTAATGATGGGCACAGAAAGAGTGAACTTGTTCAGGTATGAAGGTCTGGCAAAAGTTGGAGGAACTATTGTCTGTGTTTCTGGTGCCATATTCATGGTTTTGTACCGTGGTCCAGCATTGATAGGATATTCAGAATTGGACATTATAGCACAAAGTGAAATAAGTGCAAAAGGTCAACCAGAGCCATATGGATGGTTACTTGGTGGTTTAATGGATCTTGGGTTAGACCACTTTCATGTTGGCGTTCTGTGCTTGATAGGAAACTGCATTTGCATGGCTACTTTCCTGGCCATTCAGGCTCCTCTATTGAAAAAGTATCCTGCAAACCTATCTGTAACAGCATACTCATACTTGTTTGGAGCTGTTCTAATGGTGACAACTGCATTCTTCATGACCAATGAGTCAACTGACTGGAGCTTGACGCCATCTGAAACATTTGCTGTTATGTATGCTGGAACTGTTGCATCTGCCCTCAACTATGGACTCTTGACATGGTGCAATAAGATTTTGGGTCCAGCTATGGTTGCCCTTTATAATCCACTTCAACCTGGAGCTTCTGCCCTCTTGTCACGAATTTTCCTTGGAAGTCCAATTTTCTTGGGAAGTGTCATTGGGGGATCTTTAATCATTGCTGGTCTATATGCGGTTACTTGGGCATCTTATAGAGAAAGACAAGCTGCCCTTGGAGCTATTCCTCAGGGCTCTCGGGTCTCTGAACAAATTATTCATACAGATGGATTACTGAGCAAGAGTTCATACCAGATGGGTCACGTGTTTTCAGGGTCACCGAAGCTTTCTGATTAA 1179 0.4461 MAAVAGSLAAAGDISKAHMALVMVQLFNGGYHVVTKVALNVGVNQLVFCVFRDLLALAILAPIAYIRERRTRPPMTKRLLISFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLFRYEGLAKVGGTIVCVSGAIFMVLYRGPALIGYSELDIIAQSEISAKGQPEPYGWLLGGLMDLGLDHFHVGVLCLIGNCICMATFLAIQAPLLKKYPANLSVTAYSYLFGAVLMVTTAFFMTNESTDWSLTPSETFAVMYAGTVASALNYGLLTWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIFLGSVIGGSLIIAGLYAVTWASYRERQAALGAIPQGSRVSEQIIHTDGLLSKSSYQMGHVFSGSPKLSD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0872 392 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Dere13g0872 392 Pfam EamA-like transporter family 19 144 IPR000620 GO:0016020
Dere13g0872 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 149 - -
Dere13g0872 392 PANTHER WAT1-RELATED PROTEIN 17 349 IPR030184 GO:0016020|GO:0022857
Dere13g0872 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0872 Dere-ChrDere13 11007658 11011385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0872 16 276 Nodulin-like Gene Family AT3G45870 70.498 4.81e-127 365