Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0869 ATGCCATCAACCATGGCCCAAAGTGTGCGGACAAACAGATCTTCCTTTAGCTCCAATAATGGCTATGAGGATACTCCCGTGCACAGCTATGCTGTTGTTAGCAATGGTGATGACTATGACAGTGATAGCTCCAATTTCGCTCCACCCACACCAACAACTCTAAGAATGGCTATTCCAGCGGAACTTGCTGGAGCTGTGCCCTTGATAGATAGATTCCAGGTGGAAGGTTTTCTAAGATTAATGCAGAAACAAATTAATTCTGCTGGCAAACGTGGATTTTTTTCTAAAAGATCTATAGGCCCTCAAGTTCGAGAGAATTTTACATTTGAGGACATGTTGTGTTTCCAAAAGGATCCTATACCAACATCATTACTAAAGATTAACAGTGATTTGGTAAGCCGGGCAACTAAACTATTTCAGATGATTTTGAAATATATGGGGGTAGATTCATCTGATCGTGTAACTCCGATAAGCTTAGATGAAAGGGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAGCGTCCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAACAAACGAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTGATGTATCTATGTGCATCTTCCATGCCACCTAGTAAAGACATTGGGGGATATCTATCTGAATATGTTCACAATGTTGCACACAATGTGACTACTGATTCTGAAATCCAAGCCCTTGCATTAAATACGTTAAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCTAGGCATGTTATGCCTGGACGTGAGGAGATTGAAGCTTTGCTAACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACTTTTGAAGAAATTGCATATGACATGGCAACCACAATTGCTGATGCTGTTGAGGAAATTGCGGGGATCATTAAATTGTCAACATACACTAGCTTTAGTCTGTTTGAATGCCGTAAAGTTGTTACCAGCTCCAAGTCACCTGATTCTGGAAATGAGGAGTATATTGGTTTGGATGATAACAAATATATTGGGGACCTCTTGGCGGAATTTAAGGCAGCTAAAGATCGAAGTAAGGGAGAAATCTTGCAATGTAAACTGATATTTAAGAAAAGGCTATTTCGGGAGTCAGATGAAGCTGTGGCAGATCCAATGTTTGTGCAATTGTCCTACGTACAATTACAACATGATTATATTTTGGGTAATTATCCCGTTGGAAGGGATGACGCTGCCCAACTATCTGCATTGCAAATATTGGCTGAAATTGGATTTGTTAGAGGACCTGAGTCATGCACTGACTGGGATTTACTTCTGGAGAGGTTCCTACCTAGACAAATTGCAATCACACGGGCCAAACGGGAATGGGAGCTGGATATCCTTTCTCGCTATCATTCATTGGAGCATTTGACAAAAGATGAAGCAAGACAACAGTTTCTGCGTATATTGAGAGCACTTCCTTATGGGAATTCTGTTTTCTTCCATGTTCGCAAGATTGATGATCCTATTGGACTTCTGCCTGGAAAAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTCTTCCGTCCAGTTCCGAAGGAATACCTTCACTCAGCTGAGTTAAGAGACATAATGCAATTTGGAAGTAGTAATACTGCAGTATTTTTCAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATCAATGATGTAATGTTGCGTCGCTATTCCAAAGCAAGATCTGCTGCTGGTGGTCCTGTGAAGGGAGACTTTAGCAACAATTTTAAGACTCCTAATTTGGAAACATATGAGAGGCGTGTTCAAGATTTGTCAAAAGCTGTTGAAGAATCTCAAAGAAATGCTGATCAATTGCTGGAAGAATTACGTGAAAAACAAAAGCAAGAAGAGACAAGGCAACAAGAATTGGAGGGCTTGAAAGAATCCTTGATTGCTGATAAACAAAATCTTGAGCAAGTTATATGTGAACGTGATAGGCTTAGATCAATATGCAATGAAAAAGACAAGGCACTTCAGGCTGCAATTCTAGAGAAAAGGAATATGGAGGCAAGATTGGCCAAGTTGAGTAATCTGATGCTAGAGAACACAAAAGAGGAGCCTGTAGAAGCAAATAACCAGGATTTGCATAAGCTTGAAGATGAGCTAAAACTTCGGAAAGATGAGCTGCTTGCAGCAGAAGAAAGTATTAAAAGACTAACAAATGAAAAATTGATCTTGGATCAGAAGCTATCAGAGCTGGAGAAGAATAATGCTGATGAGATTAGTGTTCTTGAACGAAGATTTGAGCAAGAACGCAAAACCCTGAAATCTCAAGTGTATGACCTTGAAAAGAAGCTTGAAGGATTTAGACAGGAATTAGCTGCTGTTGAATCCACTCTTTCAGTCAAGGACTCTGAGTTGGTTGCATTGCAGAATAATTTAAGAGAACTGGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACTGCTGCCATATTAAGGATGCAAGGGGCTCAACTAGCTGAAATGGAAGCACTTTATAAAGAAGAGCAGGTTCTGCGGAAACGTTATTTCAACACAATAGAAGATATGAAAGGCAAGATCAGAGTTTACTGTCGTCAAAGACCTCTTAGTGAAAAAGAGATTACTGAGAAAGAAAGAGATGTTCTTACTAGTATAGATGAGTTTACAATTGAACATCCATGGAAAGATGGTAAACCAAAGCAGCATGTCTATGATCGTGTGTTTGGTGGTGATGCTACCCAAGAAGATGTCTTTGAGGATACAAGGTATTTGGTGCAGTCTGCTGTAGATGGTTATAATGTCTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAAACATTTACTATCTATGGATCTGAAAACAACCCTGGGCTTACCCCACGTGCTACAACAGAACTTTTTAAAATTTTAAGGAGAGATAGTAACAAATTCTCTTTTTCCTTAAAGGCATACATGGTGGAACTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGTAAAGCGTTTAAAATTAGATATCAAGAAGGATTCAAAGGGCATGGTAGTTGTGGAAAATGTGACAGTTGTGCCAATTTCCACTATAGAGGAATTGAATAACATAATACAAAGAGGATCTGAACGCCGGCATACATCTGGAACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATATTGTCGATTGTAATTGAAAGTACCAACCTTCAAAGTCAATCAGTTGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAGAGAGTGAAAAAGTCTGGCTCCACTGGCAGTCAACTTAAAGAAGCTCAAAGCATTAATAAATCGTTATCAGCACTTGGGGATGTCATCAGTGCTTTGTCTTCTGGCGGTCAACACATACCTTATAGGAATCACAAGTTAACTATGCTAATGAGTGATTCAATTGGCGGCAATGCCAAAACTCTTATGTTTGTGAATGTATCCCTAGCAGAGTCAAACTTGGACGAGACGCATAATTCTCTTGTGTATGCATCACGGGTGAGATCGATTGTGAATGATCCTAGCAAAAATGTTTCCTCAAAAGAGGTAGCACGATTGAAAAAGTTGGTTGCTTATTGGAAGGAGCAAGCAGGCAGAAGGGGTGATGATGAAGATTTAGAAGAAATTCAAGAGGAAAGGCCGACAAAAGAGAGGACAGATGGCCGGCATTCTTTGTAG 3795 0.396 MPSTMAQSVRTNRSSFSSNNGYEDTPVHSYAVVSNGDDYDSDSSNFAPPTPTTLRMAIPAELAGAVPLIDRFQVEGFLRLMQKQINSAGKRGFFSKRSIGPQVRENFTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQMILKYMGVDSSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHNVTTDSEIQALALNTLNALKRSVKAGPRHVMPGREEIEALLTGRKLTTIVFFLDETFEEIAYDMATTIADAVEEIAGIIKLSTYTSFSLFECRKVVTSSKSPDSGNEEYIGLDDNKYIGDLLAEFKAAKDRSKGEILQCKLIFKKRLFRESDEAVADPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILAEIGFVRGPESCTDWDLLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGKIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGPVKGDFSNNFKTPNLETYERRVQDLSKAVEESQRNADQLLEELREKQKQEETRQQELEGLKESLIADKQNLEQVICERDRLRSICNEKDKALQAAILEKRNMEARLAKLSNLMLENTKEEPVEANNQDLHKLEDELKLRKDELLAAEESIKRLTNEKLILDQKLSELEKNNADEISVLERRFEQERKTLKSQVYDLEKKLEGFRQELAAVESTLSVKDSELVALQNNLRELEELREMKEDIDRKNEQTAAILRMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRQRPLSEKEITEKERDVLTSIDEFTIEHPWKDGKPKQHVYDRVFGGDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATTELFKILRRDSNKFSFSLKAYMVELYQDTLVDLLLPKNVKRLKLDIKKDSKGMVVVENVTVVPISTIEELNNIIQRGSERRHTSGTQMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSIGGNAKTLMFVNVSLAESNLDETHNSLVYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGDDEDLEEIQEERPTKERTDGRHSL 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0869 1264 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Dere13g0869 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 1236 IPR027417 -
Dere13g0869 1264 Coils Coil 781 853 - -
Dere13g0869 1264 Gene3D - 1212 1260 - -
Dere13g0869 1264 FunFam Kinesin-like calmodulin binding protein 382 493 - -
Dere13g0869 1264 Coils Coil 724 772 - -
Dere13g0869 1264 FunFam Kinesin-like calmodulin-binding protein 832 1211 - -
Dere13g0869 1264 Coils Coil 617 676 - -
Dere13g0869 1264 PRINTS Kinesin heavy chain signature 960 981 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 PRINTS Kinesin heavy chain signature 1110 1128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 PRINTS Kinesin heavy chain signature 1079 1096 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 PRINTS Kinesin heavy chain signature 1159 1180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 Pfam Kinesin motor domain 894 1209 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 CDD FERM_B-lobe 394 492 IPR019748 -
Dere13g0869 1264 PANTHER MYOSIN VII, XV 2 894 - -
Dere13g0869 1264 MobiDBLite consensus disorder prediction 1 23 - -
Dere13g0869 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 605 - -
Dere13g0869 1264 Pfam FERM central domain 385 499 IPR019748 -
Dere13g0869 1264 SMART MyTH4_1 115 274 IPR000857 GO:0005856
Dere13g0869 1264 Gene3D MyTH4 domain 95 276 IPR038185 -
Dere13g0869 1264 Gene3D - 278 382 - -
Dere13g0869 1264 Gene3D Kinesin motor domain 875 1211 IPR036961 -
Dere13g0869 1264 SMART kinesin_4 886 1217 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 CDD FERM_C_KCBP 496 602 - -
Dere13g0869 1264 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
Dere13g0869 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Dere13g0869 1264 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Dere13g0869 1264 SUPERFAMILY PH domain-like 499 587 - -
Dere13g0869 1264 CDD KISc_C_terminal 886 1211 - -
Dere13g0869 1264 ProSitePatterns Kinesin motor domain signature. 1109 1120 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere13g0869 1264 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Dere13g0869 1264 Gene3D - 391 492 IPR014352 -
Dere13g0869 1264 Gene3D - 497 602 IPR011993 -
Dere13g0869 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Dere13g0869 1264 SMART B41_5 275 499 IPR019749 -
Dere13g0869 1264 MobiDBLite consensus disorder prediction 1236 1264 - -
Dere13g0869 1264 Coils Coil 694 721 - -
Dere13g0869 1264 ProSiteProfiles Kinesin motor domain profile. 888 1209 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0869 1264 SUPERFAMILY Prismane protein-like 831 892 IPR011254 GO:0003824|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0869 Dere-ChrDere13 10923546 10931951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0869 25 1259 Calmodulin-binding Proteins AT5G65930 75.140 0.0 1894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1479 09 18928223 18956156 Dere13g0869 13 10923546 10931951 CCT