Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0867 ATGGATATGGATGCCCTGAACTGCTCTCAAATACACGATCATCATTTGTCAATTTGTCACTGCAGAACTTTGTGTAGTGATGGAACGCTGAGTAGCATAGTGGAAGCTCTCCGGGGCATAACAGAAAACAATGCAATTGAGTTCTTTCGTTTTACCTCTACTTCTGTAGATGTTATTGTAGACAATAGCAGCAGTATCATCCGCCGCCACAAGTCTGACATGAGTCCACCGCCACGCCTCTCCCTCTCCGCCACCATCGCCGCCGTCGTCTGCCTGCTGCTCCCGGCGGCGATGTCCCAACCCCAGAACATGAAAGCAACCCAATACATTTTCGGCCCCTTCAACTTCTCCTACTACAACACCTTGGACGTCATTCCTCCGGCGTCTATCAACTTCGGAGCCCTCCAAATTACTCCGGACACCGCCGGCAACGTCAACCTCACAAACACCGCCGGCCGAATCCTTTTTCGGCGACCCTTCAAGCTCTGGGAAGACAGCGGAAGAGTCGCTTCCTTCAACACTTCCTTCCTCCTCAACGTCTTCCGCGTCAACAACGCCACTCCCGGTGAAGGCGTCGCCTTCCTCATTTCCCCATCTCTCGAGCTTCCCCGGAACAGCCATGGCCAATACCTCGGCCTCACCAACTCCACCACCGACGGCAACTCCACCAACCAATTCGTCGCAGTCGAACTAGACACCGTGAAGCAAGATTTCGACCCGGACGACAACCACGTCGGACTCAACATCAACAGCGTCAAATCAAAAGTTAAAGTTTCTCTGTCTCAATTCGGAATCCAGATCGCTCCGAACGGAACCAAGTTCTTCGTAATCTGGATAGACTACAACGGTACACGCAAAGTCATGGACGTATTCATCACCGAACAACCTGATAGAAATGCTCCTATAGTGGAAAAACCCAAAAAGCCTGTGTTAACTTCAGATCTCGACCTCAGAAGGATAGTGAAACAGAGCTCATACTTTGGGTTCTCTGCTTCCACGGGAACATTCTTCGAGCTGAACTGTGTTCTGAGATGGAACATAACGATCGAGAATCTACCTGAAAACGAGAAAAAGTCGCGATATTTGCAGATGGGTTTGGGTATTGGGGTGCCTCTGATGGTTCTGATTCTTTTGGGTGTTGCTGGATTGGGGTATTATGTGTACAGGAAGAAGAGACGAAGTGGGCCCGATGAACTAATTCTGGGGACGCTCAAAAGCTTGCCTGGGACACCCAGAGAGTTTCTGTTTAAGGATTTGAAGAAGGCCACGAACAATTTCGATGAGAAGCACAAGCTTGGAGAAGGAGGGTATGGTGTGGTGTACAGAGGAACTCTCGCAAAAGAGAATCTGGAAGTGGCAGTGAAGAAATTCTCGAGGGACAACCTTAAAGGGAAAGATGATTTCTTGGCTGAGCTCACCATTATCAATCGTCTTCGTCACAAGCATCTTGTTCGGCTGTACGGTTGGTGCCACAAGAAGGGAGTATTGCTGCTGGTGTACGAGTTCATGCCCAATGGAAGCTTGGATAACCATCTCTTCTGCGAGCGAGAGAGCCCCACACCTCCTCTCAGCTGGCACCTCCGATACAAGATCATATCAGGAGTAGCTTCCGCCCTCCACTACCTCCACAACGAGTACGACCAAAAAGTAGTCCACAGAGACCTCAAGGCCAGCAACATCATGCTCGACTCCGACTTCAACGCTCGCCTAGGCGACTTCGGCCTCGCTCGCGCTATCGAACACGAAAAAACCTCCTACGCCGAGGTCGAAGGAGTCCACGGGACAATGGGCTACATCGCGCCGGAGTGCTTCCACACCGGCAAAGCCACCCGCCAGTCCGACGTCTACGCCTTCGGGGCGGTGCTGCTGGAGGTGGTGTGTGGCCAGAGGCCATGGACCAAGATTGAGGGGTACCAGCTGCTGGTGGATTGGGTGTGGTCTTTGTATAGAGAAGGGAGGGTGCTTGATGCTGTGGATGCAAGGGTAGGGAATGAGTATGAGGTTGAAGAGGCTGAGAGGATATTGAAGCTGGGATTGGCTTGCTCTCATCCTATTGCTAGTGAGAGGCCTAAGATGCAGAGCATTGTGCAGATCATTTCTGGGTCTGTGCCTGTGCCTCATGTGCCTCCATGCAAGCCTGCTTTTGTGTGGCCTGCTGTGGATTTAGGAAGCTTTGCTAGTGATTTCACTTCACCATCTGTTTGTACTACTCCTTCTACTGCAACTCACACACACTCTTCTCTGCATGGTGCTGCTCTCTTCTCTGATGGATATCAACTCTAA 2283 0.5112 MDMDALNCSQIHDHHLSICHCRTLCSDGTLSSIVEALRGITENNAIEFFRFTSTSVDVIVDNSSSIIRRHKSDMSPPPRLSLSATIAAVVCLLLPAAMSQPQNMKATQYIFGPFNFSYYNTLDVIPPASINFGALQITPDTAGNVNLTNTAGRILFRRPFKLWEDSGRVASFNTSFLLNVFRVNNATPGEGVAFLISPSLELPRNSHGQYLGLTNSTTDGNSTNQFVAVELDTVKQDFDPDDNHVGLNINSVKSKVKVSLSQFGIQIAPNGTKFFVIWIDYNGTRKVMDVFITEQPDRNAPIVEKPKKPVLTSDLDLRRIVKQSSYFGFSASTGTFFELNCVLRWNITIENLPENEKKSRYLQMGLGIGVPLMVLILLGVAGLGYYVYRKKRRSGPDELILGTLKSLPGTPREFLFKDLKKATNNFDEKHKLGEGGYGVVYRGTLAKENLEVAVKKFSRDNLKGKDDFLAELTIINRLRHKHLVRLYGWCHKKGVLLLVYEFMPNGSLDNHLFCERESPTPPLSWHLRYKIISGVASALHYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGVHGTMGYIAPECFHTGKATRQSDVYAFGAVLLEVVCGQRPWTKIEGYQLLVDWVWSLYREGRVLDAVDARVGNEYEVEEAERILKLGLACSHPIASERPKMQSIVQIISGSVPVPHVPPCKPAFVWPAVDLGSFASDFTSPSVCTTPSTATHTHSSLHGAALFSDGYQL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0867 760 Gene3D Phosphorylase Kinase; domain 1 411 502 - -
Dere13g0867 760 FunFam probable L-type lectin-domain containing receptor kinase S.5 503 704 - -
Dere13g0867 760 ProSitePatterns Protein kinases ATP-binding region signature. 432 456 IPR017441 GO:0005524
Dere13g0867 760 CDD STKc_IRAK 432 699 - -
Dere13g0867 760 PANTHER - 136 706 - -
Dere13g0867 760 SUPERFAMILY Protein kinase-like (PK-like) 408 721 IPR011009 -
Dere13g0867 760 Pfam Legume lectin domain 114 359 IPR001220 GO:0030246
Dere13g0867 760 Gene3D - 106 366 - -
Dere13g0867 760 ProSitePatterns Legume lectins beta-chain signature. 227 233 IPR019825 -
Dere13g0867 760 FunFam probable L-type lectin-domain containing receptor kinase S.5 411 502 - -
Dere13g0867 760 Pfam Protein kinase domain 427 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0867 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Dere13g0867 760 CDD lectin_legume_LecRK_Arcelin_ConA 114 346 IPR001220 GO:0030246
Dere13g0867 760 ProSiteProfiles Protein kinase domain profile. 426 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0867 760 SUPERFAMILY Concanavalin A-like lectins/glucanases 107 354 IPR013320 -
Dere13g0867 760 SMART serkin_6 426 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0867 760 Gene3D Transferase(Phosphotransferase) domain 1 503 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0867 Dere-ChrDere13 10908350 10921429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0867 80 715 Receptor kinase-like Gene Family AT5G55830 37.168 2.87e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere13g0867 Pkinase 8.6e-50 CL0016