Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0830 ATGTCTTTGACTGCTCCAAACCCCCTTTTAAGGGTGGAGGGGATACAAGGGAGAGGGAGGGGAATGGTTGCATCTCAGCCTCTTAAAGCTGGCCAAGTTATTCTCAAAGACTCTCCTATTCTGCTTTATTCTGCTTTTCCTTTGATCCTAGAGACTTCATTCATCTCCTCTTCCCCAGGCTTCTGTGACTACTGTTTCAGAACCTTACCTCAGCCGTCCTCATCAGGAGGCCCTTCATCTTCCACAGTTTTGTGTCCTTCTTGTTGCCATCAGCGTTTTTGTAGCTCAAAGTGTCTATTGAGGGCCCAAAACGTGTCACACACTTCTTGGGTATGTCAAGCATTGTCTCATCTCCGAGTTAATCCCGTACTTCTTGAACAGCCCCTTGAGTGTCATGTCCAAGTGCATTTTCTCATTGCTGCCTACAATCTTGCCAATGTCTCCCTGTCAGACTTTCAAACTTTGCTTTCTCTTCAAGGTTCTCCTGATGATGCCACCATTGCTGCAGCTCAGTTCCTACACCCGCTTATTTCATCCCTTAGCCCATTTGCTCCAACTGGCCTTCAGAATGGGTTTTCTTTGGAACTCACTGCTTCCCTGCTGGCCAAGGATAAGCTCAATGCATTTGGCTTGATGCAACCCTTCTCTGAAGATAATGACCAGAGATCTGTCAGAGCATATGGTATTTACTGTTATGCCTCCTTCTTTAACCATGACTGCCTTCCTAATGCCTGCAGATTTGATTATGTGGATAGCAGTGGACCTGACGACGACCATAACACTGACATAATTATTCGAATGATTCATGATGCTCCTGAAGGTAGGGAGATCTGTTTGAGCTATTTCCCTGTGAATGAAAATTATACTAGTAGGCAGAAGAGATTGATGGACGACTATGGCTTCACCTGTAAGTGTGATCGATGTAAGGTTGAAGCAAATTGGTCAGATAACGAAAGTGTAGAAGATGATGCAGAGGATATGGAAGAGGCAATGGATGAGGACCAATATGAAAATATGGCAGCTTCTGGCTCGGAAAATAATTCCGAAGGAGATAACAATGATTTTCCCCATGCATATTTCTTTTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTAACTCCGCAGGGTAATACTCCATCCAATGTCATGGAATGTAATGTCTGTGGCAACTTGAAGAGAGACAATGGCTTTGATGGTGACGGAGGACCAGATGGAGTTTCCATGGAGGACTGA 1251 0.4436 MSLTAPNPLLRVEGIQGRGRGMVASQPLKAGQVILKDSPILLYSAFPLILETSFISSSPGFCDYCFRTLPQPSSSGGPSSSTVLCPSCCHQRFCSSKCLLRAQNVSHTSWVCQALSHLRVNPVLLEQPLECHVQVHFLIAAYNLANVSLSDFQTLLSLQGSPDDATIAAAQFLHPLISSLSPFAPTGLQNGFSLELTASLLAKDKLNAFGLMQPFSEDNDQRSVRAYGIYCYASFFNHDCLPNACRFDYVDSSGPDDDHNTDIIIRMIHDAPEGREICLSYFPVNENYTSRQKRLMDDYGFTCKCDRCKVEANWSDNESVEDDAEDMEEAMDEDQYENMAASGSENNSEGDNNDFPHAYFFLKFMCDRKNCWGTLAPLTPQGNTPSNVMECNVCGNLKRDNGFDGDGGPDGVSMED 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0830 416 CDD SET_SMYD 206 308 - -
Dere13g0830 416 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 404 IPR044238 -
Dere13g0830 416 SMART set_7 8 288 IPR001214 GO:0005515
Dere13g0830 416 SUPERFAMILY SET domain 8 309 IPR046341 -
Dere13g0830 416 Gene3D - 126 208 - -
Dere13g0830 416 Gene3D SET domain 21 309 IPR046341 -
Dere13g0830 416 ProSiteProfiles SET domain profile. 8 282 IPR001214 GO:0005515
Dere13g0830 416 Pfam SET domain 19 281 IPR001214 GO:0005515
Dere13g0830 416 Coils Coil 317 337 - -
Dere13g0830 416 Gene3D - 61 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0830 Dere-ChrDere13 10360136 10361386 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere13g0830 SET 1.2e-09 No_clan