Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0827 ATGGGGAGGATTAAACCTCAAGCTCTACTACAGCAAAGCAAGAGGAAAAAGGGGCCTTCTCGAATAAGTGCCACAACTATTATATTTTACGCCTTGATTCTTGTCTTGATCGTGTTTTTCCTGTTCACCGCATACAGACATTGGTCCCGCAGGTCAAGATTTGGATCAGAGAATCACATGGCAGTCTCTGAGGCTGAAAATTCTTTTGGAGACTCAAAAAAATCCGAGCTACCTGGATATGCTGTTTTAAATACCTCTAAAGGCTCTATAATAATAGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCACTTCAAGGGAATGCTTTTCCACCGTGTAATTAAGCACTATGTGATTCAGGCAGGGGATAACCAAGGGACTGGAGCTACAGAAGATTGGAATCTGAGAGGAAAGCAGTATACAAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACACTTGAACAAAAGATTTGATCTTTTCATTACAACTGCACCGATACCAGATCTAAATGAGAAGCTCATTGTGTTTGGACGAGTCATCAAGGGAGAAGATGTTGTTCAGGTGACTGAATCTGCTTTTTTCTCATGA 633 0.4044 MGRIKPQALLQQSKRKKGPSRISATTIIFYALILVLIVFFLFTAYRHWSRRSRFGSENHMAVSEAENSFGDSKKSELPGYAVLNTSKGSIIIELYKESAPEVVDEFIDLCQKGHFKGMLFHRVIKHYVIQAGDNQGTGATEDWNLRGKQYTSMKHEAFMLGTSKGKHLNKRFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQVTESAFFS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0827 210 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 202 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 Gene3D - 60 208 IPR029000 -
Dere13g0827 210 SUPERFAMILY Cyclophilin-like 79 203 IPR029000 -
Dere13g0827 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 202 - -
Dere13g0827 210 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 210 IPR002130 GO:0000413|GO:0003755
Dere13g0827 210 CDD cyclophilin 82 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0827 Dere-ChrDere13 10322383 10327436 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0827 79 197 U-box Gene Family AT5G67530 31.746 3.02e-14 68.9