Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0824 ATGGCTGAACAAGAAGGCTCTGGGAACTCTGTGTCTGTTGTCGCAACCTCTTCTCCTACTCCATTAATAAACTGGTGGGATCTGCAAGCAACTTCGCTTTCTTCCTGGAACAATAATGGTGGTAACAGCACGTGGAACAATCATCCAAACCCTGATTCTAATTCGTCTTCGTGTGAGGATCAGGATATATCAGTTTCTACATCCTTCACGAACGCCTCCAATCATTCTACCCTCACCGTTGAATCCCCTCGCACGTTCATCGAGCTTCCACCATCTTCCTCCAACTCGTTGATGGCCGAACAGCCTTCGGATAATCACCTTTGGAGTCATATTTTGTTTTTTGAGAAGCATCATCAAAATGGGTATTACAGCCAGGCCATGCTTGAGAACGAAAGGTTGAGCAAGCTCTCTAATCTTGTGAGCACTTGGTCTATTGCCCCACCTGGCCCTGAAGTTAACCATAATACTAACAGCCAGTTCGATCCTCAAATCACGCATGACAGTAACATAACTCTGAGTTCTTCGATGGATCATTCTGGAATGTTTTGTTATAATGGTCTTGGCATGAAGGTTAAGCATGAACACCATCATCATCATGAAAGTGAAGTCCCAGGAGCTATATTTGGAAGGTCATGTAATAATAGTACCATTGGATATCAAAATGGATATAACAGCCTTGCAGGGGTGGGAGATAATGGCAGGTTTCACTATGGAATGCCCAGTCTTTCTTCATGCACAAGAAATTTGACAGATGTCATATCTTTTGCCGGCATCGGAATTCATGCACTGAAACCGACTCTGAAATCCTTAAATGTATCAGAATCCAAGAAACAAGGTCTTCAGACTTCATTCTCGGCTCCCAAAGTCAAGCTAGGCGACAGGATTACAACCCTTCAGCAAATTGTGTCGCCATTTGGAAAGACTGATACAGCATCGGTGCTTTTTGAAGCAATTGGGTACATTAAGTTCTTACAAGAACAAGTCCAGGATGCATGGGGAAGCTTGGATAAGAAAGATAAGGGAGATGGGAAGGGTGACCTTAGGACCAGAGGTCTTTGTTTGGTTCCTATATCTTGTACTCCTCAAGTTTGCAGAGAGAACACAGGACCAGACTACTGGACACCAGCTTACAGAGGATGCTTGTATAGGTGA 1152 0.4392 MAEQEGSGNSVSVVATSSPTPLINWWDLQATSLSSWNNNGGNSTWNNHPNPDSNSSSCEDQDISVSTSFTNASNHSTLTVESPRTFIELPPSSSNSLMAEQPSDNHLWSHILFFEKHHQNGYYSQAMLENERLSKLSNLVSTWSIAPPGPEVNHNTNSQFDPQITHDSNITLSSSMDHSGMFCYNGLGMKVKHEHHHHHESEVPGAIFGRSCNNSTIGYQNGYNSLAGVGDNGRFHYGMPSLSSCTRNLTDVISFAGIGIHALKPTLKSLNVSESKKQGLQTSFSAPKVKLGDRITTLQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQDAWGSLDKKDKGDGKGDLRTRGLCLVPISCTPQVCRENTGPDYWTPAYRGCLYR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0824 383 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 64 363 - -
Dere13g0824 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Dere13g0824 383 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 332 IPR036638 GO:0046983
Dere13g0824 383 CDD bHLH_AtbHLH_like 290 329 IPR045239 -
Dere13g0824 383 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0824 Dere-ChrDere13 10227930 10232423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0824 20 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 30.769 8.12e-36 133