Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0823 ATGTTTGTATGTATGTGCAAGAAAGAATTGATTAAGATGAAACATAGTAATAGGAGTATCGAACTGCCTCTTAATTTGCTAGGTCTTGCTTTCATCTTGATAACTGGGAGTTTGAAACTGAAAATGGCGAGAATTAAACCTCAAGCTCTACTACAGCAAAGCAAGAGAAAGAAGGGGCCCTCCCGAATAAGTGCCACAACTATTATATTTTACACCTTAATTCTTGCTTTGATTGGGTTTTTCCTGTTCACAGCATATGGACATTGGTCCCACAGGTCAAGATTTCGATCTGAGAATCAAATGGTAGTCTCTGAGGCTGAAAACACCTTTGCGGACTCAAAAAAATCTGAGCTACCTGGATTTGCCGTTTTAAATACCTCTAAAGGCTCTATAATAGTAGAACTGTACAAGGAGAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGCCAAAAGGGGCACTTCAAGGGAATGCTTTTCCACCATGTAATTAAGCACTTTGTGATTCAAGCTGGGGAAAACCAAGGAAAGGGAGCTACAGAAGATTGGAATGTGAGAGGAAAGCGCTATTCAAGTATGAAGCATGAAGCTTTCATGCTTGGAACTTCCAAGGGAAAACACGTGAACAAAGGATTTGATCTTTACATTACAACTGCACCAATACCAGATCTAAATGAGAAGCTTATTGTGTTTGGGCGGGTTATCAAGGGAGAAGATGTTGTTCAGGAAATCGAAGAAGTGGATACAGATGAACATTACCAACCTAAAATTTCTATTGGGATACTTGATGTGACACTTAAACAGATGATCTGA 816 0.3922 MFVCMCKKELIKMKHSNRSIELPLNLLGLAFILITGSLKLKMARIKPQALLQQSKRKKGPSRISATTIIFYTLILALIGFFLFTAYGHWSHRSRFRSENQMVVSEAENTFADSKKSELPGFAVLNTSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHHVIKHFVIQAGENQGKGATEDWNVRGKRYSSMKHEAFMLGTSKGKHVNKGFDLYITTAPIPDLNEKLIVFGRVIKGEDVVQEIEEVDTDEHYQPKISIGILDVTLKQMI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0823 271 Gene3D - 106 270 IPR029000 -
Dere13g0823 271 SUPERFAMILY Cyclophilin-like 120 267 IPR029000 -
Dere13g0823 271 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 123 265 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 227 242 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 226 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 118 267 IPR002130 GO:0000413|GO:0003755
Dere13g0823 271 FunFam Peptidyl-prolyl cis-trans isomerase 108 271 - -
Dere13g0823 271 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 37 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0823 Dere-ChrDere13 10196375 10203862 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0823 120 267 U-box Gene Family AT5G67530 28.662 1.77e-15 74.3