Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0809 ATGCAAAACCCTTCCGGGGATTCTACCTCCATCACCACCAATTCTTCTCCCTCTTCCCCTGATCAAACCCCTCCTCCTCCTTATGATACCACCCAAACCGCAGCCGGCGATGTGACCGCCGCCACAGAAGGAGGAAGTGTCATGGCCGGTGTCACTGTCACTGACTCCGACGCAACAATATTCCCTTCGCAAGTGGTGGACGTGGACCTTACCAGTGGTGGTGATGGATCTCCAGTAAGGGCTGCGGTGGGCGAAGGTGGTGGGTCCTCTGCTGTGGCAGTGATGGTGGAAGGTGGGTCGACGGCGGAGAGACGGGGTAAGCAGAAGCGGAAGCCATCTCAACTGTCAGATCTTCCGCCGGGGCCACCCAAATGCAGCGAGTGCGGGAAAGAGTTTCCCAGTTGGAAGTCTGCGTTTGGGCATATGAGGGCACACCCTAATCGCCATTATCGGGGTTTCTTCAAACCTCCTGCTTTTTCTTCCCCATCTCCCACAAGACAACGCATTCGCAAACAGGTGGCAGGAGAGAATACTAATACTGGTGATCAGGAACAAGAACAAGGTGGTGGAAGGGTATTGTTCGATCTGAATCAGCCAACGGAGGAGGAAGTGGAAGTGAGGTCGTCATCTGAGGCTGCAGATAGACATGAAGCACCCGAGGCTTCTTCTTCCGATGCTGGAAAGAGTGCTGAAGAGGGAAAGAAGATTGGGTTTGACCTAAACGAACTCCCTCCTCCTGAAGATGATGGTGAACACAAGTCCTGA 765 0.5399 MQNPSGDSTSITTNSSPSSPDQTPPPPYDTTQTAAGDVTAATEGGSVMAGVTVTDSDATIFPSQVVDVDLTSGGDGSPVRAAVGEGGGSSAVAVMVEGGSTAERRGKQKRKPSQLSDLPPGPPKCSECGKEFPSWKSAFGHMRAHPNRHYRGFFKPPAFSSPSPTRQRIRKQVAGENTNTGDQEQEQGGGRVLFDLNQPTEEEVEVRSSSEAADRHEAPEASSSDAGKSAEEGKKIGFDLNELPPPEDDGEHKS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0809 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 150 IPR013087 -
Dere13g0809 254 MobiDBLite consensus disorder prediction 147 254 - -
Dere13g0809 254 MobiDBLite consensus disorder prediction 1 42 - -
Dere13g0809 254 MobiDBLite consensus disorder prediction 160 186 - -
Dere13g0809 254 ProSitePatterns Zinc finger C2H2 type domain signature. 125 145 IPR013087 -
Dere13g0809 254 MobiDBLite consensus disorder prediction 96 128 - -
Dere13g0809 254 MobiDBLite consensus disorder prediction 1 18 - -
Dere13g0809 254 MobiDBLite consensus disorder prediction 198 254 - -
Dere13g0809 254 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 30 177 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0809 120 205 C2H2 Transcription Factor Family AT4G35280 32.967 3.94e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere13g0809 None None None