Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0805 ATGGTCATTTCTGACGAGAACAATCTGAACTCCATCGAACCCGCAAACTTCCAAGGAGGGGTGGTAGGGCAGAATAGGAGGGCATTGAGCGTCATCAATCAGAGTCTAGTGGACAATCGAGGGTACCCTTGCGTCGTTAACAAGAGGGGATCCACACAAAAACATGAAATCTGTGAGAAAAAGCAGGCGGATCCAGTGCATCGACCAATTACGAGGAGGTTTGCTGCACAAATTGCTACCTCAAAGCAATCTCTCGCTGAGGAAACTAAAAAGTCAAACCCATCAACCTTAAACTCGAATGGATTTGGAGAAAGTTTATTCATCGAAGAAGAACACAAGTCACCGAGGGACCAGCCAGAGCCTATGTCTCTAGAGCAATCAGAATCATTGCAGAGTGAACCAGATCAGACGAAGGAAGTTGAGATGGAGGATATAGTTGAAGATCCTGTTATGGACATCGATAGCAGTGATGTGAATAACCATCTTGCAGTCGTGGACTATGTTCAAGATCTATATTCTTATTATAGAAAAATGGAGAGTAATAGCTTGGTCTCACCAAATTATATGGCACAACAATGTGACATTAATGAAAGGATGAGAGCTATACTGATTGACTGGCTTATTGAGGTGCAGGACAAATTTGACCTAATGCATGAGACTTTGTTCCTTACAGTTAACCTAATAGATAGATTCTTGGAGAAGCAGTCAGTGGTAAGAAAGAAGCTTCAGTTGGTCGGTCTTGTTGCCATGCTTCTGGCATGCAAGTACGAGGAAGTTTCAGTCCCCGTGGTCGGGGATCTAATCCTTATATCAGATAAAGCATACACAAGGAAAGAAGTTCTCGAAATGGAGAAGTTGATGCTTAACACATTGCAGTTTAACATGTCAGTGCCAACACCATATGTGTTCATGAGAAGGTTTCTGAAGGCAGCTCAAGCAGACAAAAAGATGGAGTTACTTGCTTTCTTCTTGATAGAGCTATCTCTTGTGGAATATGAGATGCTGAAGTTCCAACCATCTTTGCTCGCTGCAGCTGCAGTTTTCACAACTCAATGCACCATTTATGGCTTCAAACAGTGGAGCAAGACCTGTGAATGGCACACTAACTACTCAGAAGATCAACTATTAGAATGCTCTAATATGATGGTTAATTTGCACCAAAAGGCTGGAACGGGGAAGCTTACTGCAGTACATAGGAAGTATTGCTCATCTAAATTCAACTATACTTCAAAATGTGAAGCAGCAAGTTTTCTTGTGGTGAACCAATTGTAG 1272 0.4214 MVISDENNLNSIEPANFQGGVVGQNRRALSVINQSLVDNRGYPCVVNKRGSTQKHEICEKKQADPVHRPITRRFAAQIATSKQSLAEETKKSNPSTLNSNGFGESLFIEEEHKSPRDQPEPMSLEQSESLQSEPDQTKEVEMEDIVEDPVMDIDSSDVNNHLAVVDYVQDLYSYYRKMESNSLVSPNYMAQQCDINERMRAILIDWLIEVQDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMLNTLQFNMSVPTPYVFMRRFLKAAQADKKMELLAFFLIELSLVEYEMLKFQPSLLAAAAVFTTQCTIYGFKQWSKTCEWHTNYSEDQLLECSNMMVNLHQKAGTGKLTAVHRKYCSSKFNYTSKCEAASFLVVNQL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0805 423 FunFam G2/mitotic-specific cyclin-1 275 410 - -
Dere13g0805 423 PIRSF Cyclin_A_B_D_E 4 423 IPR046965 GO:0016538|GO:0044772
Dere13g0805 423 SMART Cyclin_C_2 298 415 IPR004367 -
Dere13g0805 423 MobiDBLite consensus disorder prediction 79 103 - -
Dere13g0805 423 ProSitePatterns Cyclins signature. 200 231 IPR006671 -
Dere13g0805 423 PANTHER CYCLINS 128 400 IPR039361 -
Dere13g0805 423 Gene3D - 170 411 - -
Dere13g0805 423 SMART cyclin_7 205 289 IPR013763 -
Dere13g0805 423 SMART cyclin_7 302 384 IPR013763 -
Dere13g0805 423 SUPERFAMILY Cyclin-like 297 414 IPR036915 -
Dere13g0805 423 Pfam Cyclin, C-terminal domain 298 413 IPR004367 -
Dere13g0805 423 CDD CYCLIN_AtCycB-like_rpt1 147 293 - -
Dere13g0805 423 Pfam Cyclin, N-terminal domain 170 296 IPR006671 -
Dere13g0805 423 CDD CYCLIN_AtCycB-like_rpt2 298 413 - -
Dere13g0805 423 SUPERFAMILY Cyclin-like 159 295 IPR036915 -
Dere13g0805 423 Gene3D - 184 296 - -
Dere13g0805 423 MobiDBLite consensus disorder prediction 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0805 Dere-ChrDere13 9949761 9953130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0805 1 419 Core Cell Cycle Gene Families AT1G20610 57.241 9.59e-173 488