Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0796 ATGCCAAGTTTATACGCAGCTTCTGAAGTTCATTACCATGTTAGATCAATCAGCTTGCCTTCTCAACTACACCCCACTTCTCAAAAGATTGAATCAGAGCTAGAGAAGCTAAAGACTTGGGATTTCCCAATCTCATCAGCTTCAGCTGGCACAGCAAACTCTGGCAAATGAGTTCTCTGTTGTCATCAAGAAGAGAAACATTTAGAGAAGGCCCTTGACATGTCAGTTGGGTTGCTTGATGTTTGTGGGTCTGCAAGAGAATTATTATCCAGAGGCAATGAGAGGCATGCAGCTGGAGAAGTTGATCAGCAAGGTCGACTTTATGAAGAAGCAAACATGGTGATAAAGGAAAATGGAGAATTCACTTCTGAACGTTGTAATTCCAATATGTTGATTTTTGGTGCCAAGCATAACTCGTGTAACAGAGTAAAGTATGATGCAATTCCATGTCTTAGTGAAGCCAACACTAGAAGGAATAATGATGCCATTAGGGAGTTTGTGAACTGCATCCACTGCATTAAAAGACTTTTTCCTCAATACGTGCAACAGACGAGCTTAAATGGAGATTTTGGCAATGGTGCCCTTCTAAATCAAGCTTGTAGCAGCTCTGATGGTGGAAGTACTTAA 627 0.4115 MPSLYAASEVHYHVRSISLPSQLHPTSQKIESELEKLKTWDFPISSASAGTANSGKXVLCCHQEEKHLEKALDMSVGLLDVCGSARELLSRGNERHAAGEVDQQGRLYEEANMVIKENGEFTSERCNSNMLIFGAKHNSCNRVKYDAIPCLSEANTRRNNDAIREFVNCIHCIKRLFPQYVQQTSLNGDFGNGALLNQACSSSDGGST 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0796 208 PANTHER OS06G0725500 PROTEIN 11 97 - -
Dere13g0796 208 Pfam Protein BPS1 57 96 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0796 Dere-ChrDere13 9871624 9882625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0796 160 206 B3 DNA Binding Superfamily AT1G19220 48.936 1.63e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0796 13 9871624 9882625 Dere13g0796 13 9871624 9882625 ECH