Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0785 ATGACTGCGACGTCGTTTCGTGTTTCCGCTGCTTGCTTCCATCTCTCTCCTTCGCTCTGCTCCCCTCGCCTGGATCAGCCCAGAATTTCATTTCTGAAATCGGTGAATTCTTGCAAGGCAGGGCGCATTGGTGTTGTCGAACCCAAGTTTCCAAACTACTGCACGAAAGCTGCTCTGAACGGGAATCTAGAGACCGTCGGAGTTCCGACGTCTGTGCCGGTGCGTGTAGCATACGAGCTTCTTCTTGCTGGACATCGCTATTTGGATGTGAGAACTCCCGAAGAATTTAACGCTGGACATGCTCCAGGCGCAGCTAACATACCTTACATGTACAGAGTTGGATCAGGTATGTCAAAGAACCCTGACTTTGTTGCAGAGGTCTCATCACAATTTAGCAAAGATGCTGAGATTATTGTTGGGTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTATTAGCTGCTGGATTCAATGGAATTACAGATATAGCTGGTGGATATGCTGCTTGGACTCAAAATGGATTACCAACAGAACTGTGA 546 0.4744 MTATSFRVSAACFHLSPSLCSPRLDQPRISFLKSVNSCKAGRIGVVEPKFPNYCTKAALNGNLETVGVPTSVPVRVAYELLLAGHRYLDVRTPEEFNAGHAPGAANIPYMYRVGSGMSKNPDFVAEVSSQFSKDAEIIVGCQLGKRSMMAATDLLAAGFNGITDIAGGYAAWTQNGLPTEL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0785 181 Pfam Rhodanese-like domain 87 174 IPR001763 -
Dere13g0785 181 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 67 179 IPR036873 -
Dere13g0785 181 CDD RHOD 88 172 - -
Dere13g0785 181 SMART rhod_4 71 178 IPR001763 -
Dere13g0785 181 Gene3D - 59 180 IPR036873 -
Dere13g0785 181 ProSiteProfiles Rhodanese domain profile. 81 181 IPR001763 -
Dere13g0785 181 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0785 Dere-ChrDere13 9741695 9743978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0785 71 178 Sulfurtransferasese or Rhodanese AT5G66170 46.364 5.42e-30 105